Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SRP54P61011 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.8□□□□□ -1.96
SRP54P61011 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.8□□□□□ -1.96
SRP54P61011 MTND4P16-201ENST00000466108 1367 ntBASIC2.8□□□□□ -1.96
SRP54P61011 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SRP54P61011 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SRP54P61011 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SRP54P61011 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.8□□□□□ -1.96
SRP54P61011 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SRP54P61011 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.8□□□□□ -1.96
SRP54P61011 RPL23AP39-201ENST00000415533 405 ntBASIC2.8□□□□□ -1.96
SRP54P61011 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.8□□□□□ -1.96
SRP54P61011 AC009414.1-201ENST00000427200 443 ntBASIC2.8□□□□□ -1.96
SRP54P61011 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.8□□□□□ -1.96
SRP54P61011 Z96811.1-201ENST00000445880 108 ntBASIC2.8□□□□□ -1.96
SRP54P61011 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.8□□□□□ -1.96
SRP54P61011 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.8□□□□□ -1.96
SRP54P61011 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 AC108059.3-201ENST00000456388 214 ntBASIC2.8□□□□□ -1.96
SRP54P61011 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.8□□□□□ -1.96
SRP54P61011 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.8□□□□□ -1.96
SRP54P61011 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.8□□□□□ -1.96
SRP54P61011 AP003461.1-201ENST00000528866 78 ntBASIC2.8□□□□□ -1.96
SRP54P61011 DEFB108A-201ENST00000530110 222 ntBASIC2.8□□□□□ -1.96
SRP54P61011 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP54P61011 MIR4307-201ENST00000582802 84 ntBASIC2.8□□□□□ -1.96
SRP54P61011 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
SRP54P61011 VN1R90P-201ENST00000595717 726 ntBASIC2.8□□□□□ -1.96
SRP54P61011 AC234772.3-201ENST00000602277 528 ntBASIC2.8□□□□□ -1.96
SRP54P61011 RPL12P50-201ENST00000603116 116 ntBASIC2.8□□□□□ -1.96
SRP54P61011 AL035413.2-201ENST00000604801 525 ntBASIC2.8□□□□□ -1.96
SRP54P61011 AC018714.1-201ENST00000605028 208 ntBASIC2.8□□□□□ -1.96
SRP54P61011 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRP54P61011 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRP54P61011 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRP54P61011 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRP54P61011 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.79□□□□□ -1.96
SRP54P61011 SNORD56.5-201ENST00000364281 72 ntBASIC2.79□□□□□ -1.96
SRP54P61011 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SRP54P61011 UBE2V1P2-201ENST00000397758 440 ntBASIC2.79□□□□□ -1.96
SRP54P61011 SNORA11.2-201ENST00000408318 127 ntBASIC2.79□□□□□ -1.96
SRP54P61011 VPS26BP1-201ENST00000417155 755 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 USP9YP13-201ENST00000417797 480 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AC098592.1-201ENST00000419352 333 ntBASIC2.79□□□□□ -1.96
SRP54P61011 RPL7P37-201ENST00000425095 738 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 WASF1P1-201ENST00000447560 1131 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.79□□□□□ -1.96
SRP54P61011 RN7SKP43-201ENST00000516173 320 ntBASIC2.79□□□□□ -1.96
SRP54P61011 RNU6-64P-201ENST00000517119 105 ntBASIC2.79□□□□□ -1.96
SRP54P61011 RNA5SP290-201ENST00000517133 127 ntBASIC2.79□□□□□ -1.96
SRP54P61011 RN7SKP258-201ENST00000517151 304 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AC022634.1-201ENST00000520765 532 ntBASIC2.79□□□□□ -1.96
SRP54P61011 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRP54P61011 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.79□□□□□ -1.96
SRP54P61011 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
SRP54P61011 MIR4513-201ENST00000581077 86 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AC005498.1-201ENST00000592125 465 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AC019159.1-201ENST00000605094 187 ntBASIC2.79□□□□□ -1.96
SRP54P61011 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.79□□□□□ -1.96
SRP54P61011 UCA1.1-201ENST00000620952 75 ntBASIC2.79□□□□□ -1.96
SRP54P61011 AP003485.2-201ENST00000623636 610 ntBASIC2.79□□□□□ -1.96
SRP54P61011 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
SRP54P61011 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
SRP54P61011 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SRP54P61011 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
SRP54P61011 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRP54P61011 RNU6-1214P-201ENST00000363650 109 ntBASIC2.78□□□□□ -1.96
SRP54P61011 RNU6-1284P-201ENST00000363701 100 ntBASIC2.78□□□□□ -1.96
SRP54P61011 RNU6-278P-201ENST00000390945 109 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AL592148.1-201ENST00000413568 445 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.78□□□□□ -1.96
SRP54P61011 MTND2P9-201ENST00000422293 931 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.78□□□□□ -1.96
SRP54P61011 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.78□□□□□ -1.96
SRP54P61011 AL358075.3-201ENST00000426289 226 ntBASIC2.78□□□□□ -1.96
SRP54P61011 GTF2IP20-201ENST00000431663 360 ntBASIC2.78□□□□□ -1.96
SRP54P61011 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.78□□□□□ -1.96
SRP54P61011 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.78□□□□□ -1.96
SRP54P61011 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
SRP54P61011 OR6C5P-201ENST00000452388 923 ntBASIC2.78□□□□□ -1.96
SRP54P61011 RPL12P25-201ENST00000455592 494 ntBASIC2.78□□□□□ -1.96
SRP54P61011 RPL23AP11-201ENST00000475260 469 ntBASIC2.78□□□□□ -1.96
SRP54P61011 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.78□□□□□ -1.96
SRP54P61011 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.78□□□□□ -1.96
SRP54P61011 SEM1P1-201ENST00000506694 209 ntBASIC2.78□□□□□ -1.96
SRP54P61011 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRP54P61011 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms