Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC025165.5-201ENST00000602802 578 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC106900.2-201ENST00000604994 317 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 Z84480.1-201ENST00000605131 311 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC126118.1-201ENST00000607744 628 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN20P56880 AC022149.2-201ENST00000621061 203 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC005609.4-201ENST00000625071 447 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN20P56880 AL157786.1-207ENST00000627771 695 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN20P56880 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.17□□□□□ -1.9
CLDN20P56880 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN20P56880 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CLDN20P56880 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN20P56880 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLDN20P56880 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN20P56880 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN20P56880 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLDN20P56880 OR4G2P-201ENST00000328113 903 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 Y_RNA.367-201ENST00000365544 101 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 RNU6-701P-201ENST00000384059 107 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 CALM2P3-201ENST00000400429 449 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AL513331.1-201ENST00000411908 397 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 BX842559.1-201ENST00000419615 532 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 MTCO3P30-201ENST00000426425 670 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN20P56880 USP9YP28-201ENST00000435142 589 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN20P56880 RPL23AP20-201ENST00000447965 421 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 RBMY2UP-201ENST00000453474 324 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 HMGN2P16-201ENST00000456802 261 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC019235.1-201ENST00000503847 207 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 AC117522.1-201ENST00000509821 380 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 NCAPGP2-201ENST00000557911 754 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 AC012507.3-201ENST00000603556 477 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC024220.1-201ENST00000603675 484 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC025449.1-201ENST00000603896 529 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC107304.1-201ENST00000604229 296 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AL121992.2-201ENST00000606262 256 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC092954.2-201ENST00000609103 430 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN20P56880 MIR7851-201ENST00000610611 160 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN20P56880 AL353746.1-201ENST00000566293 6881 ntBASIC3.16□□□□□ -1.9
CLDN20P56880 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CLDN20P56880 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN20P56880 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.15□□□□□ -1.9
CLDN20P56880 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN20P56880 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN20P56880 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN20P56880 MTCO1P12-201ENST00000414273 1543 ntBASIC3.15□□□□□ -1.9
CLDN20P56880 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN20P56880 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN20P56880 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 RNU6-188P-201ENST00000364207 107 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 SMIM11P1-201ENST00000369586 178 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 MIR7-3-201ENST00000384898 110 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 MIR183-201ENST00000384958 110 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 MIR1-2-201ENST00000384961 85 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 RPS4XP8-201ENST00000402039 771 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 EIF1P1-201ENST00000421436 341 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 AL451062.2-201ENST00000427515 271 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN20P56880 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN20P56880 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CLDN20P56880 AC126389.1-201ENST00000477436 290 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 RPL31P60-201ENST00000478450 367 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 AC026427.2-201ENST00000506228 536 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 AC009646.1-201ENST00000510455 318 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 SNORD27.1-201ENST00000516319 72 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CLDN20P56880 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN20P56880 AP001804.3-201ENST00000525146 880 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 AP006587.4-201ENST00000526053 529 ntBASIC3.15□□□□□ -1.91
CLDN20P56880 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.15□□□□□ -1.91
CLDN20P56880 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN20P56880 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms