Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RN7SKP299-201ENST00000606679 301 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC107294.1-201ENST00000609524 467 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AL133173.2-201ENST00000614270 90 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC006133.1-201ENST00000617106 264 ntBASIC3.08□□□□□ -1.92
CDH13P55290 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC048344.4-201ENST00000619744 527 ntBASIC3.08□□□□□ -1.92
CDH13P55290 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH13P55290 AP003122.6-201ENST00000623831 495 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC090582.1-201ENST00000636321 199 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC110774.1-201ENST00000623567 2018 ntBASIC3.08□□□□□ -1.92
CDH13P55290 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDH13P55290 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH13P55290 AL359693.1-201ENST00000614959 2407 ntBASIC3.08□□□□□ -1.92
CDH13P55290 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH13P55290 CR848007.1-201ENST00000442354 1699 ntBASIC3.08□□□□□ -1.92
CDH13P55290 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 MTND5P29-201ENST00000458676 1807 ntBASIC3.07□□□□□ -1.92
CDH13P55290 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH13P55290 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH13P55290 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH13P55290 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH13P55290 AC073343.1-201ENST00000328239 651 ntBASIC3.07□□□□□ -1.92
CDH13P55290 Y_RNA.245-201ENST00000364493 95 ntBASIC3.07□□□□□ -1.92
CDH13P55290 SNORA20.2-201ENST00000383922 131 ntBASIC3.07□□□□□ -1.92
CDH13P55290 SNORA75-201ENST00000384158 137 ntBASIC3.07□□□□□ -1.92
CDH13P55290 RNU6-14P-201ENST00000384630 106 ntBASIC3.07□□□□□ -1.92
CDH13P55290 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
CDH13P55290 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH13P55290 RNA5SP252-201ENST00000391131 119 ntBASIC3.07□□□□□ -1.92
CDH13P55290 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH13P55290 AL139397.2-201ENST00000404529 772 ntBASIC3.07□□□□□ -1.92
CDH13P55290 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
CDH13P55290 RN7SKP27-201ENST00000410684 333 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC245054.2-201ENST00000415639 319 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 RPL36AP6-201ENST00000435770 321 ntBASIC3.07□□□□□ -1.92
CDH13P55290 RPS24P1-201ENST00000438550 371 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH13P55290 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH13P55290 RPS12P18-201ENST00000442381 270 ntBASIC3.07□□□□□ -1.92
CDH13P55290 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH13P55290 NEFMP1-201ENST00000443423 1006 ntBASIC3.07□□□□□ -1.92
CDH13P55290 MTCO1P19-201ENST00000443487 500 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC244505.5-201ENST00000443639 207 ntBASIC3.07□□□□□ -1.92
CDH13P55290 MTCO2P18-201ENST00000457151 658 ntBASIC3.07□□□□□ -1.92
CDH13P55290 RPL37P6-201ENST00000460682 294 ntBASIC3.07□□□□□ -1.92
CDH13P55290 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
CDH13P55290 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 RN7SL293P-201ENST00000481765 281 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH13P55290 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH13P55290 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH13P55290 AC022616.3-201ENST00000523940 148 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 AP003072.2-201ENST00000527756 676 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
CDH13P55290 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH13P55290 MIR1254-2-201ENST00000579553 63 ntBASIC3.07□□□□□ -1.92
CDH13P55290 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH13P55290 AC015871.2-201ENST00000603605 948 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AL358072.1-201ENST00000604156 575 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC104763.2-201ENST00000604179 382 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC064872.1-201ENST00000604823 1072 ntBASIC3.07□□□□□ -1.92
CDH13P55290 AC080013.6-201ENST00000606185 215 ntBASIC3.07□□□□□ -1.92
CDH13P55290 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH13P55290 AL365204.3-201ENST00000612448 685 ntBASIC3.07□□□□□ -1.92
CDH13P55290 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 AC110994.2-201ENST00000635481 492 ntBASIC3.07□□□□□ -1.92
CDH13P55290 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CDH13P55290 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH13P55290 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDH13P55290 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH13P55290 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH13P55290 Y_RNA.201-201ENST00000364052 96 ntBASIC3.06□□□□□ -1.92
CDH13P55290 RNU1-33P-201ENST00000364249 162 ntBASIC3.06□□□□□ -1.92
CDH13P55290 RNU6-140P-201ENST00000384566 108 ntBASIC3.06□□□□□ -1.92
CDH13P55290 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH13P55290 MTND3P17-201ENST00000416968 344 ntBASIC3.06□□□□□ -1.92
CDH13P55290 MTCO2P34-201ENST00000421994 607 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC007283.2-201ENST00000424739 197 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 AC104651.1-201ENST00000427559 735 ntBASIC3.06□□□□□ -1.92
CDH13P55290 ELOCP14-201ENST00000428070 331 ntBASIC3.06□□□□□ -1.92
CDH13P55290 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH13P55290 OR2B8P-201ENST00000432841 938 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH13P55290 AC104850.1-201ENST00000435940 476 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AL353706.1-201ENST00000436728 494 ntBASIC3.06□□□□□ -1.92
CDH13P55290 ELOCP7-201ENST00000439968 331 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AL031667.1-201ENST00000440222 725 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH13P55290 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 CYCSP35-201ENST00000451978 304 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AL122001.1-201ENST00000457027 370 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC092798.1-201ENST00000458542 409 ntBASIC3.06□□□□□ -1.92
CDH13P55290 RNU6-953P-201ENST00000459154 107 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC091179.1-201ENST00000461606 579 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms