Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 OR5J1P-201ENST00000313544 939 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 SNORA60-201ENST00000362396 134 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 Y_RNA.315-201ENST00000365117 102 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 RHOT1P2-201ENST00000366423 333 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATXN1P54253 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATXN1P54253 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATXN1P54253 RNU6-1106P-201ENST00000390845 107 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 RNA5SP306-201ENST00000411087 107 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 RNU2-71P-201ENST00000411395 189 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC092447.6-201ENST00000414578 210 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 ZNF90P2-204ENST00000419323 1075 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AL691449.1-201ENST00000426570 421 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 HMGN2P31-201ENST00000432430 273 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AL451050.1-201ENST00000450126 415 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC104308.1-201ENST00000454621 333 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 U8.20-201ENST00000459445 131 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 RPS20P20-201ENST00000460498 340 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 MTCO2P29-201ENST00000465212 189 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 VN1R17P-201ENST00000472048 1090 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 RPS29P2-201ENST00000479278 136 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC027575.1-201ENST00000481064 460 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AL139099.1-201ENST00000497398 403 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.16□□□□□ -1.74
ATXN1P54253 COX7A2P2-201ENST00000505291 250 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC004062.1-201ENST00000509926 645 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.16□□□□□ -1.74
ATXN1P54253 AC107934.1-201ENST00000522215 217 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC243972.3-201ENST00000539655 198 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AL512360.1-201ENST00000555346 234 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.16□□□□□ -1.74
ATXN1P54253 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.16□□□□□ -1.74
ATXN1P54253 MIR3690-201ENST00000580266 75 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.16□□□□□ -1.74
ATXN1P54253 AL391646.1-201ENST00000603860 190 ntBASIC4.16□□□□□ -1.74
ATXN1P54253 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.16□□□□□ -1.74
ATXN1P54253 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.16□□□□□ -1.74
ATXN1P54253 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.16□□□□□ -1.74
ATXN1P54253 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATXN1P54253 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATXN1P54253 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATXN1P54253 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATXN1P54253 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATXN1P54253 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ATXN1P54253 AL133383.2-201ENST00000622958 2336 ntBASIC4.15□□□□□ -1.74
ATXN1P54253 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATXN1P54253 Y_RNA.184-201ENST00000363884 108 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 SNORA20.2-201ENST00000383922 131 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 RNU6-639P-201ENST00000384074 107 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 MIR93-201ENST00000385024 80 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 CISD1P1-201ENST00000393907 327 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 MIR548I2-201ENST00000408348 149 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AL160275.2-201ENST00000412010 394 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 HMGB3P20-201ENST00000417997 600 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.15□□□□□ -1.75
ATXN1P54253 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.15□□□□□ -1.75
ATXN1P54253 AC236972.1-201ENST00000433225 199 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.15□□□□□ -1.75
ATXN1P54253 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.15□□□□□ -1.75
ATXN1P54253 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.15□□□□□ -1.75
ATXN1P54253 SNORD19B-201ENST00000459623 84 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AC010469.1-201ENST00000463864 576 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 RPL21P104-201ENST00000464143 478 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AL135752.1-201ENST00000479477 471 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AC005741.1-201ENST00000511094 432 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 RNA5SP154-201ENST00000516193 111 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.15□□□□□ -1.75
ATXN1P54253 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.15□□□□□ -1.75
ATXN1P54253 AL512310.1-201ENST00000548639 172 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 SUB1P2-201ENST00000556401 297 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.15□□□□□ -1.75
ATXN1P54253 AC005357.1-201ENST00000588399 301 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.15□□□□□ -1.75
ATXN1P54253 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.15□□□□□ -1.75
ATXN1P54253 AC091167.4-201ENST00000605079 184 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 U4.1-201ENST00000620349 87 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AC078938.1-201ENST00000620993 318 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 AC139792.3-201ENST00000623525 224 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 U6.105-201ENST00000637379 88 ntBASIC4.15□□□□□ -1.75
ATXN1P54253 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATXN1P54253 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATXN1P54253 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.15□□□□□ -1.75
ATXN1P54253 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATXN1P54253 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.15□□□□□ -1.75
ATXN1P54253 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATXN1P54253 AC009902.3-201ENST00000606235 2172 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 AC068254.2-201ENST00000623938 3577 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATXN1P54253 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ATXN1P54253 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATXN1P54253 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATXN1P54253 RNU6-774P-201ENST00000363238 107 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 RNY4P16-201ENST00000364768 94 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 SNORA5A-201ENST00000384111 134 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 Y_RNA.500-201ENST00000384466 111 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 RNVU1-14-201ENST00000384770 164 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 MIR548M-201ENST00000408260 86 ntBASIC4.14□□□□□ -1.75
ATXN1P54253 SNORA3C-201ENST00000408792 125 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms