Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A4P53420 ZNF680P1-201ENST00000436625 1469 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 TEX21P-201ENST00000447107 1476 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 Z99496.1-201ENST00000469424 1477 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
COL4A4P53420 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A4P53420 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A4P53420 METTL21EP-201ENST00000298105 713 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COL4A4P53420 OR4G2P-201ENST00000328113 903 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 Y_RNA.311-201ENST00000365068 96 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A4P53420 RNY3P10-201ENST00000384764 102 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A4P53420 FGF7P8-201ENST00000402994 292 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AL079342.2-201ENST00000403367 482 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AL591416.1-201ENST00000404015 867 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AL590002.1-201ENST00000406554 418 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 RPL26P37-201ENST00000411983 438 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A4P53420 AL109913.1-201ENST00000421173 514 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 MRPS36P1-201ENST00000421291 307 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A4P53420 MTND4LP16-201ENST00000440828 295 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AL353898.1-201ENST00000444055 238 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A4P53420 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A4P53420 RNU7-140P-201ENST00000459546 60 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 SNORD42A-201ENST00000459584 64 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC072039.1-201ENST00000477611 581 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A4P53420 MTND5P5-201ENST00000503764 376 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC147055.4-201ENST00000504399 745 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC090071.1-201ENST00000507713 644 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC116337.1-201ENST00000509680 687 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC026412.2-201ENST00000512270 1075 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 PRELID3BP4-201ENST00000515476 571 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC104383.1-201ENST00000530297 370 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 OR5BN1P-201ENST00000532955 829 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC005832.3-201ENST00000537929 631 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 AL121839.1-201ENST00000556233 1185 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 HMGB3P26-201ENST00000560051 582 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC005730.3-201ENST00000583067 366 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC044792.1-201ENST00000593294 196 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AL645944.1-201ENST00000603857 493 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC011374.2-201ENST00000607135 526 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 AL607023.1-201ENST00000620045 248 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC087821.2-201ENST00000637086 450 ntBASIC2.5□□□□□ -2.01
COL4A4P53420 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
COL4A4P53420 AC022336.2-201ENST00000568966 2538 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC066616.2-201ENST00000559334 1481 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AL354685.2-201ENST00000448218 1447 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC245100.2-201ENST00000454544 1679 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.49□□□□□ -2.01
COL4A4P53420 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL4A4P53420 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL4A4P53420 CUL1P1-201ENST00000509510 2425 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COL4A4P53420 FGF7P2-201ENST00000332473 296 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 Y_RNA.408-201ENST00000383987 102 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 RNU6-549P-201ENST00000384433 107 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 SNORA64-201ENST00000384674 134 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 NCSTNP1-201ENST00000406229 144 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 RNU6-321P-201ENST00000410912 106 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC027644.1-201ENST00000419595 298 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 RPL21P32-201ENST00000419877 477 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC009237.2-201ENST00000421358 284 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A4P53420 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC092427.1-201ENST00000439177 601 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AL162388.1-201ENST00000450912 352 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AL049830.2-201ENST00000480072 201 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 HMGB1P36-201ENST00000487709 576 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC107222.1-201ENST00000510899 637 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.49□□□□□ -2.01
COL4A4P53420 RNU6-507P-201ENST00000516045 100 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 RNU6-875P-201ENST00000516488 106 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AP005639.2-201ENST00000527592 928 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.49□□□□□ -2.01
COL4A4P53420 AC124947.2-202ENST00000552735 133 ntBASIC2.49□□□□□ -2.01
COL4A4P53420 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A4P53420 PCMTD1P2-201ENST00000565017 355 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms