Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK3P51956 FAM92A1P1-201ENST00000528023 890 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.82□□□□□ -1.8
NEK3P51956 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEK3P51956 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEK3P51956 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEK3P51956 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK3P51956 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.82□□□□□ -1.8
NEK3P51956 AL355598.1-201ENST00000604169 202 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC004805.2-201ENST00000605382 482 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.82□□□□□ -1.8
NEK3P51956 AC017083.3-201ENST00000609955 700 ntBASIC3.82□□□□□ -1.8
NEK3P51956 DUSP12P1-201ENST00000612874 516 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC079684.1-201ENST00000621405 437 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC124864.2-201ENST00000624736 186 ntBASIC3.82□□□□□ -1.8
NEK3P51956 AC099654.12-201ENST00000639868 649 ntBASIC3.82□□□□□ -1.8
NEK3P51956 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEK3P51956 MTND5P7-201ENST00000413558 1798 ntBASIC3.81□□□□□ -1.8
NEK3P51956 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEK3P51956 Y_RNA.159-201ENST00000363674 87 ntBASIC3.81□□□□□ -1.8
NEK3P51956 Y_RNA.481-201ENST00000384373 102 ntBASIC3.81□□□□□ -1.8
NEK3P51956 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NEK3P51956 RPS4XP8-201ENST00000402039 771 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK3P51956 SDCBPP3-201ENST00000419629 891 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AC099548.1-201ENST00000421443 426 ntBASIC3.81□□□□□ -1.8
NEK3P51956 GOT2P5-201ENST00000433995 546 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AL451074.3-201ENST00000437709 472 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK3P51956 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NEK3P51956 VN1R34P-201ENST00000447387 883 ntBASIC3.81□□□□□ -1.8
NEK3P51956 RPL23AP20-201ENST00000447965 421 ntBASIC3.81□□□□□ -1.8
NEK3P51956 HMGB3P8-201ENST00000449709 577 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.81□□□□□ -1.8
NEK3P51956 CECR9-201ENST00000453421 199 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AP002884.2-201ENST00000471647 395 ntBASIC3.81□□□□□ -1.8
NEK3P51956 RPL9P6-201ENST00000492764 598 ntBASIC3.81□□□□□ -1.8
NEK3P51956 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AC105417.1-201ENST00000514691 285 ntBASIC3.81□□□□□ -1.8
NEK3P51956 RNU6-914P-201ENST00000516749 109 ntBASIC3.81□□□□□ -1.8
NEK3P51956 RNA5SP165-201ENST00000517142 115 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK3P51956 MTCYBP20-201ENST00000524239 1129 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK3P51956 RANP3-201ENST00000530970 276 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.81□□□□□ -1.8
NEK3P51956 AC084782.3-201ENST00000612282 578 ntBASIC3.81□□□□□ -1.8
NEK3P51956 AC004852.3-201ENST00000614131 326 ntBASIC3.81□□□□□ -1.8
NEK3P51956 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK3P51956 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEK3P51956 MAPK10-322ENST00000641485 4530 ntBASIC3.81□□□□□ -1.8
NEK3P51956 GABRG2-229ENST00000641017 3628 ntBASIC3.81□□□□□ -1.8
NEK3P51956 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEK3P51956 ZNF285B-201ENST00000561698 1767 ntBASIC3.81□□□□□ -1.8
NEK3P51956 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NEK3P51956 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NEK3P51956 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK3P51956 AC103988.1-201ENST00000566382 2177 ntBASIC3.8□□□□□ -1.8
NEK3P51956 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NEK3P51956 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEK3P51956 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEK3P51956 RNU6-198P-201ENST00000384258 104 ntBASIC3.8□□□□□ -1.8
NEK3P51956 MIR670-201ENST00000390142 98 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEK3P51956 AC069157.1-201ENST00000421749 137 ntBASIC3.8□□□□□ -1.8
NEK3P51956 MTCYBP5-201ENST00000423752 1135 ntBASIC3.8□□□□□ -1.8
NEK3P51956 HMGB1P9-201ENST00000429856 646 ntBASIC3.8□□□□□ -1.8
NEK3P51956 RPL36AP53-201ENST00000432891 316 ntBASIC3.8□□□□□ -1.8
NEK3P51956 snoU13.28-201ENST00000459235 104 ntBASIC3.8□□□□□ -1.8
NEK3P51956 RNU7-23P-201ENST00000459465 62 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AL049830.2-201ENST00000480072 201 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AC109927.2-201ENST00000506416 303 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AC026784.1-201ENST00000507986 352 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AC098591.2-201ENST00000510152 315 ntBASIC3.8□□□□□ -1.8
NEK3P51956 RNU1-95P-201ENST00000516357 160 ntBASIC3.8□□□□□ -1.8
NEK3P51956 RNU1-128P-201ENST00000516704 160 ntBASIC3.8□□□□□ -1.8
NEK3P51956 RNU6-685P-201ENST00000517088 95 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK3P51956 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.8□□□□□ -1.8
NEK3P51956 MIR4738-201ENST00000579134 87 ntBASIC3.8□□□□□ -1.8
NEK3P51956 MIR4775-201ENST00000581168 75 ntBASIC3.8□□□□□ -1.8
NEK3P51956 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.8□□□□□ -1.8
NEK3P51956 AC012507.3-201ENST00000603556 477 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AL391646.1-201ENST00000603860 190 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AC130324.3-201ENST00000614165 542 ntBASIC3.8□□□□□ -1.8
NEK3P51956 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.8□□□□□ -1.8
NEK3P51956 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.8□□□□□ -1.8
NEK3P51956 AL158209.2-201ENST00000619266 216 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AC098679.4-201ENST00000624241 654 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AL157786.1-207ENST00000627771 695 ntBASIC3.8□□□□□ -1.8
NEK3P51956 AC084035.1-201ENST00000634543 607 ntBASIC3.8□□□□□ -1.8
NEK3P51956 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK3P51956 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NEK3P51956 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEK3P51956 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEK3P51956 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.8□□□□□ -1.8
NEK3P51956 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEK3P51956 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
NEK3P51956 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms