Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.41□□□□□ -1.38
PRIM1P49642 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PRIM1P49642 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 SNORD113.2-201ENST00000364166 89 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 RN7SKP227-201ENST00000364445 330 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 Y_RNA.240-201ENST00000364469 95 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 RNU6-1035P-201ENST00000384477 107 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 MIR129-1-201ENST00000384972 72 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 SNORA12.2-201ENST00000391040 156 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 AC017079.2-201ENST00000416102 485 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.41□□□□□ -1.38
PRIM1P49642 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.41□□□□□ -1.38
PRIM1P49642 SCARNA22-201ENST00000503991 125 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.41□□□□□ -1.38
PRIM1P49642 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
PRIM1P49642 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.41□□□□□ -1.38
PRIM1P49642 RN7SL290P-201ENST00000578661 300 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.41□□□□□ -1.38
PRIM1P49642 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 AL596275.2-204ENST00000641628 552 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 AL596275.2-206ENST00000641957 626 ntBASIC6.41□□□□□ -1.38
PRIM1P49642 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.41□□□□□ -1.38
PRIM1P49642 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC6.41□□□□□ -1.38
PRIM1P49642 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC6.4□□□□□ -1.38
PRIM1P49642 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.4□□□□□ -1.38
PRIM1P49642 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRIM1P49642 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.4□□□□□ -1.38
PRIM1P49642 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.4□□□□□ -1.38
PRIM1P49642 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRIM1P49642 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRIM1P49642 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PRIM1P49642 Y_RNA.76-201ENST00000362931 109 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 RNA5SP447-201ENST00000363749 119 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 RNA5SP223-201ENST00000365174 120 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRIM1P49642 RNA5SP241-201ENST00000391326 114 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.4□□□□□ -1.38
PRIM1P49642 RPEP3-201ENST00000425462 676 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.4□□□□□ -1.38
PRIM1P49642 RPL23AP22-201ENST00000437556 453 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 RPL7AP28-201ENST00000464513 571 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.4□□□□□ -1.38
PRIM1P49642 TRAPPC2P7-201ENST00000509650 231 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 RNU6-479P-201ENST00000516348 105 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 RNU6-1315P-201ENST00000517187 99 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 AC022559.1-201ENST00000520905 205 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 AC025755.1-201ENST00000521306 278 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PRIM1P49642 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.4□□□□□ -1.38
PRIM1P49642 BNIP3P5-201ENST00000562290 498 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 RPL23AP78-201ENST00000599928 470 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRIM1P49642 AC240442.1-201ENST00000616055 283 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 MIR6839-201ENST00000620425 113 ntBASIC6.4□□□□□ -1.38
PRIM1P49642 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PRIM1P49642 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
PRIM1P49642 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PRIM1P49642 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PRIM1P49642 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRIM1P49642 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRIM1P49642 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRIM1P49642 RNA5SP515-201ENST00000364570 118 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PRIM1P49642 U3.30-201ENST00000391308 210 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.39□□□□□ -1.39
PRIM1P49642 RPL7AP73-201ENST00000413490 353 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 RANP8-201ENST00000444720 713 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.39□□□□□ -1.39
PRIM1P49642 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PRIM1P49642 ANXA2P1-201ENST00000505539 926 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 ENPP7P11-201ENST00000505915 627 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 AC074198.2-201ENST00000508153 258 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 APOOP4-201ENST00000513530 597 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 GMPSP1-201ENST00000514075 579 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 RNU6-927P-201ENST00000516199 100 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.39□□□□□ -1.39
PRIM1P49642 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.39□□□□□ -1.39
PRIM1P49642 AC004024.1-201ENST00000549244 247 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 FAM27B-201ENST00000610601 213 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 CR381572.2-201ENST00000624852 397 ntBASIC6.39□□□□□ -1.39
PRIM1P49642 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.39□□□□□ -1.39
PRIM1P49642 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.39□□□□□ -1.39
PRIM1P49642 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRIM1P49642 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRIM1P49642 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PRIM1P49642 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PRIM1P49642 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRIM1P49642 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PRIM1P49642 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PRIM1P49642 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PRIM1P49642 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PRIM1P49642 AC007685.1-201ENST00000329806 452 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 Y_RNA.504-201ENST00000384481 104 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 AL079342.1-201ENST00000401460 267 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms