Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RNA5SP450-201ENST00000411206 102 ntBASIC1.73□□□□□ -2.13
CDC34P49427 RPS3AP25-201ENST00000411660 793 ntBASIC1.73□□□□□ -2.13
CDC34P49427 HMGB1P11-201ENST00000413899 637 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC007435.1-201ENST00000421086 415 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AL353729.1-201ENST00000425044 720 ntBASIC1.73□□□□□ -2.13
CDC34P49427 RSL24D1P8-201ENST00000434442 492 ntBASIC1.73□□□□□ -2.13
CDC34P49427 RPL23AP83-201ENST00000434984 473 ntBASIC1.73□□□□□ -2.13
CDC34P49427 SDR42E1P3-201ENST00000438345 502 ntBASIC1.73□□□□□ -2.13
CDC34P49427 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.73□□□□□ -2.13
CDC34P49427 AC000041.1-201ENST00000439655 175 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC093155.1-201ENST00000440164 826 ntBASIC1.73□□□□□ -2.13
CDC34P49427 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.73□□□□□ -2.13
CDC34P49427 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.73□□□□□ -2.13
CDC34P49427 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.73□□□□□ -2.13
CDC34P49427 MTND1P9-201ENST00000453775 944 ntBASIC1.73□□□□□ -2.13
CDC34P49427 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.73□□□□□ -2.13
CDC34P49427 snoU13.8-201ENST00000458890 104 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC005410.1-202ENST00000460347 485 ntBASIC1.73□□□□□ -2.13
CDC34P49427 FAM133DP-201ENST00000464802 691 ntBASIC1.73□□□□□ -2.13
CDC34P49427 FTH1P2-201ENST00000466086 412 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.73□□□□□ -2.13
CDC34P49427 RPL22P13-201ENST00000493291 347 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.73□□□□□ -2.13
CDC34P49427 AC234781.5-201ENST00000508429 271 ntBASIC1.73□□□□□ -2.13
CDC34P49427 RNA5SP290-201ENST00000517133 127 ntBASIC1.73□□□□□ -2.13
CDC34P49427 MTCYBP20-201ENST00000524239 1129 ntBASIC1.73□□□□□ -2.13
CDC34P49427 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.73□□□□□ -2.13
CDC34P49427 LRRC37A5P-203ENST00000580181 585 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC090897.2-201ENST00000581715 130 ntBASIC1.73□□□□□ -2.13
CDC34P49427 ELOCP29-201ENST00000588193 334 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.73□□□□□ -2.13
CDC34P49427 AC003001.2-201ENST00000616294 831 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC009233.1-201ENST00000616477 371 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC253576.2-201ENST00000618815 580 ntBASIC1.73□□□□□ -2.13
CDC34P49427 AC009831.4-201ENST00000620744 325 ntBASIC1.73□□□□□ -2.13
CDC34P49427 OR8B1P-202ENST00000641132 1178 ntBASIC1.73□□□□□ -2.13
CDC34P49427 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDC34P49427 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
CDC34P49427 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.72□□□□□ -2.13
CDC34P49427 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.72□□□□□ -2.13
CDC34P49427 Z99496.1-201ENST00000469424 1477 ntBASIC1.72□□□□□ -2.13
CDC34P49427 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CDC34P49427 RNA5SP276-201ENST00000362580 94 ntBASIC1.72□□□□□ -2.13
CDC34P49427 RNU6-216P-201ENST00000363282 104 ntBASIC1.72□□□□□ -2.13
CDC34P49427 RNU6-1078P-201ENST00000364522 103 ntBASIC1.72□□□□□ -2.13
CDC34P49427 RNU6-359P-201ENST00000365466 108 ntBASIC1.72□□□□□ -2.13
CDC34P49427 SNORA67.4-201ENST00000384688 142 ntBASIC1.72□□□□□ -2.13
CDC34P49427 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CDC34P49427 RNA5SP338-201ENST00000410495 85 ntBASIC1.72□□□□□ -2.13
CDC34P49427 RNU2-52P-201ENST00000410680 190 ntBASIC1.72□□□□□ -2.13
CDC34P49427 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.72□□□□□ -2.13
CDC34P49427 AC005005.2-201ENST00000420779 380 ntBASIC1.72□□□□□ -2.13
CDC34P49427 PTP4A1P7-201ENST00000423476 514 ntBASIC1.72□□□□□ -2.13
CDC34P49427 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDC34P49427 Z98742.2-201ENST00000431564 187 ntBASIC1.72□□□□□ -2.13
CDC34P49427 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.72□□□□□ -2.13
CDC34P49427 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.72□□□□□ -2.13
CDC34P49427 NANOGP2-201ENST00000435391 727 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AL158053.1-201ENST00000441503 453 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.72□□□□□ -2.13
CDC34P49427 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDC34P49427 CYP2C59P-201ENST00000457790 269 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AC013267.1-201ENST00000458227 267 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AC092902.1-201ENST00000486999 259 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AC114981.1-201ENST00000503897 678 ntBASIC1.72□□□□□ -2.13
CDC34P49427 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDC34P49427 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.72□□□□□ -2.13
CDC34P49427 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.72□□□□□ -2.13
CDC34P49427 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.72□□□□□ -2.13
CDC34P49427 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.72□□□□□ -2.13
CDC34P49427 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.72□□□□□ -2.13
CDC34P49427 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.72□□□□□ -2.13
CDC34P49427 AC091152.3-201ENST00000604227 325 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AL773524.1-201ENST00000614065 229 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AC009159.1-201ENST00000618386 642 ntBASIC1.72□□□□□ -2.13
CDC34P49427 MIR5739-201ENST00000619803 80 ntBASIC1.72□□□□□ -2.13
CDC34P49427 MIR6132-201ENST00000622083 109 ntBASIC1.72□□□□□ -2.13
CDC34P49427 HPVC1-201ENST00000629899 1198 ntBASIC1.72□□□□□ -2.13
CDC34P49427 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.72□□□□□ -2.13
CDC34P49427 WWP1P1-201ENST00000466609 2769 ntBASIC1.71□□□□□ -2.14
CDC34P49427 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDC34P49427 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.71□□□□□ -2.14
CDC34P49427 RNU6-748P-201ENST00000384648 107 ntBASIC1.71□□□□□ -2.14
CDC34P49427 SNORA48.3-201ENST00000391081 134 ntBASIC1.71□□□□□ -2.14
CDC34P49427 AC244636.1-201ENST00000421152 228 ntBASIC1.71□□□□□ -2.14
CDC34P49427 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.71□□□□□ -2.14
CDC34P49427 SEPT7P5-201ENST00000434048 306 ntBASIC1.71□□□□□ -2.14
CDC34P49427 HMGN2P10-201ENST00000448085 265 ntBASIC1.71□□□□□ -2.14
CDC34P49427 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.71□□□□□ -2.14
CDC34P49427 SNORA84-201ENST00000459229 133 ntBASIC1.71□□□□□ -2.14
CDC34P49427 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.71□□□□□ -2.14
CDC34P49427 RPL23AP41-201ENST00000484754 458 ntBASIC1.71□□□□□ -2.14
CDC34P49427 AC018437.1-201ENST00000492214 406 ntBASIC1.71□□□□□ -2.14
CDC34P49427 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.71□□□□□ -2.14
CDC34P49427 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.71□□□□□ -2.14
CDC34P49427 AC020699.1-201ENST00000505161 445 ntBASIC1.71□□□□□ -2.14
CDC34P49427 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.71□□□□□ -2.14
CDC34P49427 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.71□□□□□ -2.14
CDC34P49427 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms