Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC006445.2-201ENST00000510061 472 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC009646.1-201ENST00000510455 318 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AL117351.2-201ENST00000513571 157 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC105417.1-201ENST00000514691 285 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.9□□□□□ -1.95
NKX2-1P43699 RNA5SP315-201ENST00000516340 116 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 Y_RNA.693-201ENST00000516641 110 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 RNA5SP312-201ENST00000517068 116 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC104383.1-201ENST00000530297 370 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.9□□□□□ -1.95
NKX2-1P43699 ARL2BPP2-201ENST00000550907 489 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.9□□□□□ -1.95
NKX2-1P43699 HMGB1P33-201ENST00000563485 527 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 HSPE1P7-201ENST00000604681 321 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AL590392.1-201ENST00000604960 446 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AC083809.1-201ENST00000615051 472 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AL357559.1-201ENST00000622228 274 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 MIR6500-201ENST00000622700 86 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC005183.1-201ENST00000603687 1979 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AC233263.6-201ENST00000631132 1963 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.9□□□□□ -1.95
NKX2-1P43699 AL359693.1-201ENST00000614959 2407 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.9□□□□□ -1.95
NKX2-1P43699 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.9□□□□□ -1.95
NKX2-1P43699 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NKX2-1P43699 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-1P43699 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-1P43699 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-1P43699 SPRR2C-201ENST00000290702 219 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AL139276.1-201ENST00000311910 1001 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 RNA5SP383-201ENST00000362934 120 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 RNU6-1322P-201ENST00000364309 107 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 RNU2-36P-201ENST00000410361 191 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC069157.1-201ENST00000421749 137 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC007283.2-201ENST00000424739 197 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AP000907.1-201ENST00000428428 510 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 HMGB1P27-201ENST00000431429 603 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AL451074.3-201ENST00000437709 472 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 MTATP6P13-201ENST00000438531 667 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 RPS27P29-201ENST00000463110 252 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX2-1P43699 RN7SL594P-201ENST00000470590 287 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC021205.2-201ENST00000480069 347 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AF213884.2-201ENST00000510417 903 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 MTCO1P35-201ENST00000515270 228 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 SNORA64.4-201ENST00000516632 81 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 SNORD59.2-201ENST00000516873 68 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AC107934.2-201ENST00000518653 310 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AP006587.4-201ENST00000526053 529 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 OR5AQ1P-201ENST00000527596 927 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-1P43699 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.89□□□□□ -1.95
NKX2-1P43699 PARP1P2-201ENST00000556806 195 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 NCAPGP2-201ENST00000557911 754 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC027807.1-201ENST00000559921 996 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC007823.1-201ENST00000569932 1566 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC136624.4-201ENST00000573044 370 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC053481.4-201ENST00000583164 216 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AC098848.2-201ENST00000588023 330 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AC012507.3-201ENST00000603556 477 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AL136363.1-201ENST00000605349 337 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC107294.1-201ENST00000609524 467 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC068944.2-201ENST00000610373 403 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-1P43699 SNORA50A-202ENST00000629536 136 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 MIR1321-201ENST00000637766 79 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-1P43699 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NKX2-1P43699 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-1P43699 AC010680.1-201ENST00000590024 3590 ntBASIC2.89□□□□□ -1.95
NKX2-1P43699 AC103710.2-202ENST00000641454 2853 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-1P43699 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
NKX2-1P43699 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-1P43699 RNU6-1085P-201ENST00000363576 107 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 Y_RNA.372-201ENST00000365599 102 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms