Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AP004247.1-201ENST00000531556 1289 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.07□□□□□ -2.24
SNCAP37840 AC067805.1-201ENST00000559344 470 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC023813.2-201ENST00000564321 469 ntBASIC1.07□□□□□ -2.24
SNCAP37840 MIR3198-2-201ENST00000577868 80 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC103987.3-201ENST00000582071 292 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC008121.1-201ENST00000603244 268 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC068276.1-201ENST00000605793 379 ntBASIC1.07□□□□□ -2.24
SNCAP37840 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SNCAP37840 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
SNCAP37840 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.07□□□□□ -2.24
SNCAP37840 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SNCAP37840 ZNF72P-201ENST00000425869 1908 ntBASIC1.07□□□□□ -2.24
SNCAP37840 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SNCAP37840 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
SNCAP37840 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SNCAP37840 RNU1-72P-201ENST00000362976 153 ntBASIC1.06□□□□□ -2.24
SNCAP37840 TAF9BP2-201ENST00000400856 499 ntBASIC1.06□□□□□ -2.24
SNCAP37840 RNU6-174P-201ENST00000410406 106 ntBASIC1.06□□□□□ -2.24
SNCAP37840 RPL30P13-201ENST00000418873 348 ntBASIC1.06□□□□□ -2.24
SNCAP37840 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.06□□□□□ -2.24
SNCAP37840 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.06□□□□□ -2.24
SNCAP37840 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.06□□□□□ -2.24
SNCAP37840 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.06□□□□□ -2.24
SNCAP37840 RPS15AP36-201ENST00000492022 382 ntBASIC1.06□□□□□ -2.24
SNCAP37840 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.06□□□□□ -2.24
SNCAP37840 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.06□□□□□ -2.24
SNCAP37840 RNU6-548P-201ENST00000517083 115 ntBASIC1.06□□□□□ -2.24
SNCAP37840 SCARNA3-201ENST00000517097 143 ntBASIC1.06□□□□□ -2.24
SNCAP37840 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.06□□□□□ -2.24
SNCAP37840 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.06□□□□□ -2.24
SNCAP37840 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.06□□□□□ -2.24
SNCAP37840 MIR3921-201ENST00000577308 85 ntBASIC1.06□□□□□ -2.24
SNCAP37840 MIR3199-1-201ENST00000582434 88 ntBASIC1.06□□□□□ -2.24
SNCAP37840 AP001485.1-201ENST00000604799 199 ntBASIC1.06□□□□□ -2.24
SNCAP37840 AL021997.1-201ENST00000605757 193 ntBASIC1.06□□□□□ -2.24
SNCAP37840 AL050343.2-201ENST00000607338 280 ntBASIC1.06□□□□□ -2.24
SNCAP37840 RMST_6.1-201ENST00000611980 203 ntBASIC1.06□□□□□ -2.24
SNCAP37840 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.06□□□□□ -2.24
SNCAP37840 AC068057.2-201ENST00000624047 895 ntBASIC1.06□□□□□ -2.24
SNCAP37840 OR5H6-203ENST00000642105 978 ntBASIC1.06□□□□□ -2.24
SNCAP37840 ZNF209P-201ENST00000593450 2304 ntBASIC1.06□□□□□ -2.24
SNCAP37840 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SNCAP37840 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SNCAP37840 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SNCAP37840 MIR26B-201ENST00000362251 77 ntBASIC1.05□□□□□ -2.24
SNCAP37840 RNU6-167P-201ENST00000384292 106 ntBASIC1.05□□□□□ -2.24
SNCAP37840 NPM1P10-201ENST00000398310 865 ntBASIC1.05□□□□□ -2.24
SNCAP37840 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SNCAP37840 CYCSP49-201ENST00000420810 319 ntBASIC1.05□□□□□ -2.24
SNCAP37840 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.05□□□□□ -2.24
SNCAP37840 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.05□□□□□ -2.24
SNCAP37840 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.05□□□□□ -2.24
SNCAP37840 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.05□□□□□ -2.24
SNCAP37840 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.05□□□□□ -2.24
SNCAP37840 snoU13.26-201ENST00000459452 105 ntBASIC1.05□□□□□ -2.24
SNCAP37840 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SNCAP37840 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SNCAP37840 RNU6-1095P-201ENST00000516148 108 ntBASIC1.05□□□□□ -2.24
SNCAP37840 RNU4-18P-201ENST00000516751 149 ntBASIC1.05□□□□□ -2.24
SNCAP37840 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.05□□□□□ -2.24
SNCAP37840 AC012435.1-202ENST00000568772 240 ntBASIC1.05□□□□□ -2.24
SNCAP37840 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.05□□□□□ -2.24
SNCAP37840 AC024619.4-201ENST00000580924 316 ntBASIC1.05□□□□□ -2.24
SNCAP37840 MIR4713-201ENST00000582691 75 ntBASIC1.05□□□□□ -2.24
SNCAP37840 AL645939.4-201ENST00000604495 135 ntBASIC1.05□□□□□ -2.24
SNCAP37840 AC079791.1-201ENST00000605356 973 ntBASIC1.05□□□□□ -2.24
SNCAP37840 AL592148.2-201ENST00000612210 372 ntBASIC1.05□□□□□ -2.24
SNCAP37840 AC091953.2-201ENST00000623979 160 ntBASIC1.05□□□□□ -2.24
SNCAP37840 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.05□□□□□ -2.24
SNCAP37840 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.04□□□□□ -2.24
SNCAP37840 ZNF29P-201ENST00000225587 168 ntBASIC1.04□□□□□ -2.24
SNCAP37840 RNU4-13P-201ENST00000364019 141 ntBASIC1.04□□□□□ -2.24
SNCAP37840 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SNCAP37840 RNU6-338P-201ENST00000383888 105 ntBASIC1.04□□□□□ -2.24
SNCAP37840 RNU6-748P-201ENST00000384648 107 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AL035405.1-201ENST00000400795 710 ntBASIC1.04□□□□□ -2.24
SNCAP37840 MIR1289-2-201ENST00000408360 111 ntBASIC1.04□□□□□ -2.24
SNCAP37840 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.04□□□□□ -2.24
SNCAP37840 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.04□□□□□ -2.24
SNCAP37840 HMGB1P27-201ENST00000431429 603 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.04□□□□□ -2.24
SNCAP37840 RPL23AP23-201ENST00000452590 471 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC021087.2-201ENST00000504656 1203 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.04□□□□□ -2.24
SNCAP37840 AC114786.4-201ENST00000508771 728 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC008526.1-201ENST00000509149 338 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC114797.1-201ENST00000514003 728 ntBASIC1.04□□□□□ -2.24
SNCAP37840 RNU6-1282P-201ENST00000516735 96 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC090821.2-201ENST00000523552 176 ntBASIC1.04□□□□□ -2.24
SNCAP37840 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.04□□□□□ -2.24
SNCAP37840 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.04□□□□□ -2.24
SNCAP37840 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.04□□□□□ -2.24
SNCAP37840 SUB1P3-201ENST00000564581 315 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AL158827.2-201ENST00000602494 330 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC104763.3-201ENST00000613765 618 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AL691447.3-201ENST00000635020 330 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC087821.2-201ENST00000637086 450 ntBASIC1.04□□□□□ -2.24
SNCAP37840 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.04□□□□□ -2.24
SNCAP37840 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms