Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCLP35914 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC129850.1-201ENST00000436203 508 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCLP35914 RAC1P7-201ENST00000445367 377 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCLP35914 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 RNA5SP269-201ENST00000459032 137 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 SEM1P1-201ENST00000506694 209 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCLP35914 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC079600.2-201ENST00000550076 130 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCLP35914 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC138761.3-201ENST00000579993 334 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC060771.1-201ENST00000582031 164 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AC023043.3-201ENST00000593113 385 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HMGCLP35914 AC025594.3-201ENST00000613068 790 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 MIR6076-201ENST00000617521 113 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCLP35914 AL603839.4-201ENST00000624658 1005 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AC093591.3-201ENST00000634516 308 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AC099654.7-201ENST00000635788 2127 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 AC099654.13-201ENST00000639774 207 ntBASIC2.73□□□□□ -1.97
HMGCLP35914 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HMGCLP35914 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCLP35914 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HMGCLP35914 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCLP35914 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCLP35914 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGCLP35914 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGCLP35914 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HMGCLP35914 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 OR5J1P-201ENST00000313544 939 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGCLP35914 SNORA80A-201ENST00000363922 136 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 RNU4-40P-201ENST00000364351 143 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 RNU6-7-201ENST00000364784 107 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 RNU6-8-201ENST00000365467 107 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AL512633.1-201ENST00000399931 655 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HMGCLP35914 SNORD88.1-201ENST00000408684 91 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCLP35914 RPL17P12-201ENST00000413391 526 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 UBE2D3P2-201ENST00000424409 445 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 OR4K11P-201ENST00000431829 904 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AC112220.1-201ENST00000434628 355 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 MTND1P28-201ENST00000435623 950 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 RPL35AP22-201ENST00000436855 335 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.72□□□□□ -1.97
HMGCLP35914 SDAD1P2-201ENST00000441308 2028 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AL121871.1-201ENST00000443413 436 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 TPT1P14-201ENST00000448018 505 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 RPL23AP31-201ENST00000456160 467 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGCLP35914 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 RPL23AP41-201ENST00000484754 458 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGCLP35914 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCLP35914 AC025881.1-201ENST00000518851 512 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCLP35914 AC060788.1-201ENST00000521318 469 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AC022878.1-201ENST00000530684 149 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCLP35914 AL391156.1-201ENST00000554965 554 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AL355836.1-201ENST00000555951 870 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 ZNF519P3-201ENST00000557158 1032 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AL133153.1-201ENST00000557756 303 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AC012435.1-202ENST00000568772 240 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AC105224.1-201ENST00000587055 421 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 TPMTP1-201ENST00000592307 737 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AL590229.1-201ENST00000603497 542 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AL033523.1-201ENST00000605153 153 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 AC009159.1-201ENST00000618386 642 ntBASIC2.72□□□□□ -1.97
HMGCLP35914 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCLP35914 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGCLP35914 AC092125.1-201ENST00000562568 1995 ntBASIC2.71□□□□□ -1.98
HMGCLP35914 DEFB108F-201ENST00000344638 222 ntBASIC2.71□□□□□ -1.98
HMGCLP35914 RNU6-223P-201ENST00000362830 107 ntBASIC2.71□□□□□ -1.98
HMGCLP35914 RNU5E-5P-201ENST00000365379 116 ntBASIC2.71□□□□□ -1.98
HMGCLP35914 AL360182.1-201ENST00000397433 468 ntBASIC2.71□□□□□ -1.98
HMGCLP35914 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms