Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHMT2P34897 AP002748.2-201ENST00000528671 348 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.46□□□□□ -2.02
SHMT2P34897 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.46□□□□□ -2.02
SHMT2P34897 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.46□□□□□ -2.02
SHMT2P34897 NRBF2P5-201ENST00000603087 788 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AC013244.3-201ENST00000605614 388 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AL607023.1-201ENST00000620045 248 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.46□□□□□ -2.02
SHMT2P34897 ZNF519P1-201ENST00000449011 1626 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHMT2P34897 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.45□□□□□ -2.02
SHMT2P34897 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SHMT2P34897 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHMT2P34897 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHMT2P34897 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHMT2P34897 RNU6-1180P-201ENST00000364935 107 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 RNU6-741P-201ENST00000383889 107 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 RNU6-432P-201ENST00000384196 109 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 RNU6-769P-201ENST00000384407 104 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 RNU6-1035P-201ENST00000384477 107 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AL359704.1-201ENST00000411586 781 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 UBE2FP3-201ENST00000436366 524 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 RPL35AP22-201ENST00000436855 335 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.45□□□□□ -2.02
SHMT2P34897 FAM103A2P-201ENST00000444122 354 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.45□□□□□ -2.02
SHMT2P34897 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.45□□□□□ -2.02
SHMT2P34897 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.45□□□□□ -2.02
SHMT2P34897 AC126389.1-201ENST00000477436 290 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHMT2P34897 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 AC114781.4-201ENST00000513707 639 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC110760.3-202ENST00000515177 371 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 RN7SKP24-201ENST00000515888 284 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 RNA5SP148-201ENST00000516527 94 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC013828.2-201ENST00000532487 235 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC068587.4-201ENST00000533893 186 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 TRAV28-201ENST00000557548 323 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.45□□□□□ -2.02
SHMT2P34897 MIR544B-201ENST00000582372 78 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC021171.1-201ENST00000603137 706 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AL357094.1-201ENST00000603845 844 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC025588.2-201ENST00000604851 466 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC093838.1-201ENST00000613014 469 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AC012150.2-201ENST00000621300 544 ntBASIC2.45□□□□□ -2.02
SHMT2P34897 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.45□□□□□ -2.02
SHMT2P34897 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
SHMT2P34897 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHMT2P34897 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SHMT2P34897 ZNF271P-202ENST00000465539 1970 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 RNU6-198P-201ENST00000384258 104 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 MIR19A-201ENST00000384878 82 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SHMT2P34897 AL109755.1-201ENST00000401791 649 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 UBE2FP1-201ENST00000416536 447 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.44□□□□□ -2.02
SHMT2P34897 AL451054.2-201ENST00000420896 202 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.44□□□□□ -2.02
SHMT2P34897 Z82210.1-201ENST00000440037 231 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.44□□□□□ -2.02
SHMT2P34897 MTCO3P45-201ENST00000443036 613 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.44□□□□□ -2.02
SHMT2P34897 RPS20P20-201ENST00000460498 340 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 MTND2P14-201ENST00000482139 351 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.44□□□□□ -2.02
SHMT2P34897 RNA5SP320-201ENST00000516263 124 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 RN7SKP265-201ENST00000516448 223 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 RNU6-1282P-201ENST00000516735 96 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 SNORA31.15-201ENST00000516771 132 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.44□□□□□ -2.02
SHMT2P34897 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.44□□□□□ -2.02
SHMT2P34897 AC234778.2-201ENST00000566241 354 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AC068135.2-201ENST00000569293 1028 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 RPL23AP84-201ENST00000571193 464 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.44□□□□□ -2.02
SHMT2P34897 AC010133.1-201ENST00000615809 842 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AC140725.3-201ENST00000616193 880 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.44□□□□□ -2.02
SHMT2P34897 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.44□□□□□ -2.02
SHMT2P34897 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.44□□□□□ -2.02
SHMT2P34897 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHMT2P34897 Y_RNA.302-201ENST00000364997 102 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.43□□□□□ -2.02
SHMT2P34897 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SHMT2P34897 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 RNU6-1200P-201ENST00000384162 107 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 RNU2-33P-201ENST00000410344 192 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms