Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXC12P31275 AL450023.3-201ENST00000440592 271 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXC12P31275 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXC12P31275 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC12P31275 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RPL7AP28-201ENST00000464513 571 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RPS20P22-201ENST00000473700 357 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AL160314.1-201ENST00000490836 438 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AC018437.1-201ENST00000492214 406 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RNA5SP384-201ENST00000516615 116 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 TRAV37-201ENST00000553906 342 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 CR381572.2-201ENST00000624852 397 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXC12P31275 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC12P31275 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
HOXC12P31275 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC12P31275 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC12P31275 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC12P31275 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC12P31275 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
HOXC12P31275 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC12P31275 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC12P31275 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC12P31275 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HOXC12P31275 RN7SKP227-201ENST00000364445 330 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 Y_RNA.245-201ENST00000364493 95 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 MIR517A-201ENST00000385001 87 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 MIR1290-201ENST00000408735 78 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 TBCAP2-201ENST00000416175 326 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 CYP4F29P-201ENST00000420685 446 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC12P31275 UBE2D3P2-201ENST00000424409 445 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 USMG5P1-201ENST00000425964 177 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC12P31275 RPL35AP21-201ENST00000437667 333 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC12P31275 RPL21P23-201ENST00000446654 460 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC12P31275 DHFRP3-201ENST00000455595 559 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 RNU1-86P-201ENST00000516108 154 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 MIR892C-201ENST00000516410 77 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 SCARNA16.2-201ENST00000516520 172 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 RNU1-107P-201ENST00000516617 154 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 RNU6-699P-201ENST00000517081 110 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 RNA5SP290-201ENST00000517133 127 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 ATP5F1P5-201ENST00000526403 760 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 AP004242.1-201ENST00000533701 349 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXC12P31275 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC12P31275 MIR1254-2-201ENST00000579553 63 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC12P31275 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXC12P31275 AC006157.1-201ENST00000611750 366 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 AC007485.1-201ENST00000616755 206 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 BX005214.3-202ENST00000619809 325 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC12P31275 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC12P31275 EOGT-210ENST00000615922 1931 ntBASIC4.28□□□□□ -1.72
HOXC12P31275 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HOXC12P31275 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC12P31275 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC12P31275 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXC12P31275 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC12P31275 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
HOXC12P31275 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC12P31275 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC12P31275 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC12P31275 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC12P31275 RNA5SP191-201ENST00000362585 102 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 RNU6-490P-201ENST00000362985 107 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 Y_RNA.252-201ENST00000364556 101 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 RNU6-1032P-201ENST00000384100 107 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 MRPL42P3-201ENST00000401492 326 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 Z85995.1-201ENST00000415547 335 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 NDUFB4P7-201ENST00000423198 363 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC12P31275 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC12P31275 PCMTD1P1-201ENST00000455560 355 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 RN7SL517P-201ENST00000462240 305 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 AC078817.1-201ENST00000492623 435 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC12P31275 AC073073.1-201ENST00000493920 463 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC12P31275 AC022493.2-201ENST00000506122 481 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC12P31275 ENPP7P9-201ENST00000514456 627 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 RN7SKP122-201ENST00000515923 296 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 SNORA25.10-201ENST00000515926 124 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 RNU6-120P-201ENST00000516077 103 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 RN7SKP21-201ENST00000516503 220 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC12P31275 AC004024.1-201ENST00000549244 247 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 AC010653.1-201ENST00000571108 881 ntBASIC4.27□□□□□ -1.73
HOXC12P31275 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC12P31275 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC12P31275 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC12P31275 NCAPGP1-201ENST00000505112 1814 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms