Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MTCO3P24-201ENST00000572729 782 ntBASIC2.86□□□□□ -1.95
SHC1P29353 AC090615.1-201ENST00000577519 154 ntBASIC2.86□□□□□ -1.95
SHC1P29353 SNORA59B-202ENST00000578183 701 ntBASIC2.86□□□□□ -1.95
SHC1P29353 MIR3167-201ENST00000579623 85 ntBASIC2.86□□□□□ -1.95
SHC1P29353 NRBF2P1-201ENST00000587407 859 ntBASIC2.86□□□□□ -1.95
SHC1P29353 AL391646.1-201ENST00000603860 190 ntBASIC2.86□□□□□ -1.95
SHC1P29353 BX664608.1-201ENST00000610519 487 ntBASIC2.86□□□□□ -1.95
SHC1P29353 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.86□□□□□ -1.95
SHC1P29353 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.86□□□□□ -1.95
SHC1P29353 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.86□□□□□ -1.95
SHC1P29353 AC091925.2-201ENST00000625059 256 ntBASIC2.86□□□□□ -1.95
SHC1P29353 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.86□□□□□ -1.95
SHC1P29353 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.86□□□□□ -1.95
SHC1P29353 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHC1P29353 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SHC1P29353 AC007256.1-201ENST00000392253 2765 ntBASIC2.86□□□□□ -1.95
SHC1P29353 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.86□□□□□ -1.95
SHC1P29353 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SHC1P29353 AC008264.2-201ENST00000610193 3731 ntBASIC2.85□□□□□ -1.95
SHC1P29353 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.85□□□□□ -1.95
SHC1P29353 FRG1BP-201ENST00000278882 761 ntBASIC2.85□□□□□ -1.95
SHC1P29353 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHC1P29353 RNU5E-1-201ENST00000362477 120 ntBASIC2.85□□□□□ -1.95
SHC1P29353 RNA5SP258-201ENST00000362750 119 ntBASIC2.85□□□□□ -1.95
SHC1P29353 RNA5SP374-201ENST00000362939 125 ntBASIC2.85□□□□□ -1.95
SHC1P29353 RNU6-1090P-201ENST00000364065 94 ntBASIC2.85□□□□□ -1.95
SHC1P29353 U3.19-201ENST00000390893 196 ntBASIC2.85□□□□□ -1.95
SHC1P29353 RPL23AP32-201ENST00000395315 459 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC127391.1-201ENST00000411737 98 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC245054.2-201ENST00000415639 319 ntBASIC2.85□□□□□ -1.95
SHC1P29353 MTCO3P12-201ENST00000416718 547 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHC1P29353 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.85□□□□□ -1.95
SHC1P29353 AC019097.1-201ENST00000424783 735 ntBASIC2.85□□□□□ -1.95
SHC1P29353 MTCO2P19-201ENST00000427513 598 ntBASIC2.85□□□□□ -1.95
SHC1P29353 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.85□□□□□ -1.95
SHC1P29353 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.85□□□□□ -1.95
SHC1P29353 FCF1P1-201ENST00000432690 571 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.85□□□□□ -1.95
SHC1P29353 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.85□□□□□ -1.95
SHC1P29353 NFU1P2-201ENST00000448700 469 ntBASIC2.85□□□□□ -1.95
SHC1P29353 UQCRHP3-201ENST00000451503 251 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AL359385.1-201ENST00000456509 365 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AP1S2P1-201ENST00000457344 379 ntBASIC2.85□□□□□ -1.95
SHC1P29353 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.85□□□□□ -1.95
SHC1P29353 RN7SL807P-201ENST00000470923 297 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC109925.1-201ENST00000478069 331 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC055855.1-201ENST00000489563 579 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC069439.1-201ENST00000494739 167 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC010587.1-201ENST00000505809 469 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.85□□□□□ -1.95
SHC1P29353 RNA5SP385-201ENST00000515947 110 ntBASIC2.85□□□□□ -1.95
SHC1P29353 RNU6-27P-201ENST00000516146 107 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.85□□□□□ -1.95
SHC1P29353 AP001893.2-201ENST00000526949 202 ntBASIC2.85□□□□□ -1.95
SHC1P29353 OR5AQ1P-201ENST00000527596 927 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHC1P29353 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.85□□□□□ -1.95
SHC1P29353 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.85□□□□□ -1.95
SHC1P29353 UBL5P2-201ENST00000583788 219 ntBASIC2.85□□□□□ -1.95
SHC1P29353 BNIP3P30-201ENST00000601184 574 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC245014.2-201ENST00000603689 287 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC004853.1-201ENST00000604902 698 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC246785.4-201ENST00000605374 287 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AL161734.1-201ENST00000609720 557 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AL133173.2-201ENST00000614270 90 ntBASIC2.85□□□□□ -1.95
SHC1P29353 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.85□□□□□ -1.95
SHC1P29353 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHC1P29353 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHC1P29353 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHC1P29353 AC073346.2-201ENST00000624724 2058 ntBASIC2.84□□□□□ -1.95
SHC1P29353 MTND5P19-201ENST00000424872 1794 ntBASIC2.84□□□□□ -1.95
SHC1P29353 Y_RNA.1-201ENST00000352915 104 ntBASIC2.84□□□□□ -1.95
SHC1P29353 Y_RNA.9-201ENST00000362354 101 ntBASIC2.84□□□□□ -1.95
SHC1P29353 RNU6-989P-201ENST00000362756 107 ntBASIC2.84□□□□□ -1.95
SHC1P29353 RNY4P14-201ENST00000363656 96 ntBASIC2.84□□□□□ -1.95
SHC1P29353 Y_RNA.159-201ENST00000363674 87 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 RNU6-821P-201ENST00000390995 107 ntBASIC2.84□□□□□ -1.95
SHC1P29353 CIR1P3-201ENST00000405137 479 ntBASIC2.84□□□□□ -1.95
SHC1P29353 RNA5SP129-201ENST00000410276 118 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.84□□□□□ -1.95
SHC1P29353 AL353678.1-201ENST00000422735 741 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC007283.2-201ENST00000424739 197 ntBASIC2.84□□□□□ -1.95
SHC1P29353 OR2AS1P-201ENST00000427827 319 ntBASIC2.84□□□□□ -1.95
SHC1P29353 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.84□□□□□ -1.95
SHC1P29353 AC006028.1-201ENST00000438379 402 ntBASIC2.84□□□□□ -1.95
SHC1P29353 MTATP6P30-201ENST00000443540 664 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AL671855.1-201ENST00000446875 1203 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 AC104308.1-201ENST00000454621 333 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 RPL7P5-201ENST00000471472 736 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC006445.1-201ENST00000491925 405 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.84□□□□□ -1.95
SHC1P29353 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 Y_RNA.704-201ENST00000516851 102 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms