Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RPL26P9-201ENST00000457466 433 ntBASIC2.14□□□□□ -2.07
USF1P22415 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.14□□□□□ -2.07
USF1P22415 HMGB3P3-201ENST00000510526 400 ntBASIC2.14□□□□□ -2.07
USF1P22415 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.14□□□□□ -2.07
USF1P22415 RNU1-41P-201ENST00000516161 162 ntBASIC2.14□□□□□ -2.07
USF1P22415 RNU1-48P-201ENST00000516400 162 ntBASIC2.14□□□□□ -2.07
USF1P22415 RNU1-104P-201ENST00000517280 175 ntBASIC2.14□□□□□ -2.07
USF1P22415 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 MIR3117-201ENST00000584034 78 ntBASIC2.14□□□□□ -2.07
USF1P22415 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.14□□□□□ -2.07
USF1P22415 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.14□□□□□ -2.07
USF1P22415 AC239868.4-201ENST00000608318 671 ntBASIC2.14□□□□□ -2.07
USF1P22415 AC011890.2-201ENST00000613393 294 ntBASIC2.14□□□□□ -2.07
USF1P22415 AP000720.1-201ENST00000625091 483 ntBASIC2.14□□□□□ -2.07
USF1P22415 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.14□□□□□ -2.07
USF1P22415 AC116618.1-201ENST00000634617 774 ntBASIC2.14□□□□□ -2.07
USF1P22415 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
USF1P22415 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USF1P22415 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
USF1P22415 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.14□□□□□ -2.07
USF1P22415 ZNF658B-202ENST00000615961 3375 ntBASIC2.13□□□□□ -2.07
USF1P22415 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
USF1P22415 AC009902.3-201ENST00000606235 2172 ntBASIC2.13□□□□□ -2.07
USF1P22415 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.13□□□□□ -2.07
USF1P22415 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USF1P22415 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USF1P22415 SNORA25.6-201ENST00000364121 118 ntBASIC2.13□□□□□ -2.07
USF1P22415 TAS2R15P-201ENST00000390674 928 ntBASIC2.13□□□□□ -2.07
USF1P22415 CCNG1P1-201ENST00000406783 885 ntBASIC2.13□□□□□ -2.07
USF1P22415 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.13□□□□□ -2.07
USF1P22415 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
USF1P22415 AL135786.1-201ENST00000415892 214 ntBASIC2.13□□□□□ -2.07
USF1P22415 UBE2FP1-201ENST00000416536 447 ntBASIC2.13□□□□□ -2.07
USF1P22415 USP9YP13-201ENST00000417797 480 ntBASIC2.13□□□□□ -2.07
USF1P22415 RPS3AP37-201ENST00000419176 745 ntBASIC2.13□□□□□ -2.07
USF1P22415 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.13□□□□□ -2.07
USF1P22415 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.13□□□□□ -2.07
USF1P22415 CR769767.1-201ENST00000436337 346 ntBASIC2.13□□□□□ -2.07
USF1P22415 EEF1A1P39-201ENST00000440791 250 ntBASIC2.13□□□□□ -2.07
USF1P22415 AC011816.1-201ENST00000441346 546 ntBASIC2.13□□□□□ -2.07
USF1P22415 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.13□□□□□ -2.07
USF1P22415 RPL21P134-201ENST00000453468 483 ntBASIC2.13□□□□□ -2.07
USF1P22415 RPL12P25-201ENST00000455592 494 ntBASIC2.13□□□□□ -2.07
USF1P22415 AC107626.1-201ENST00000471084 183 ntBASIC2.13□□□□□ -2.07
USF1P22415 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.13□□□□□ -2.07
USF1P22415 AC108729.1-201ENST00000487812 947 ntBASIC2.13□□□□□ -2.07
USF1P22415 SRIP1-201ENST00000489235 288 ntBASIC2.13□□□□□ -2.07
USF1P22415 AL160314.1-201ENST00000490836 438 ntBASIC2.13□□□□□ -2.07
USF1P22415 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.13□□□□□ -2.07
USF1P22415 RNA5SP320-201ENST00000516263 124 ntBASIC2.13□□□□□ -2.07
USF1P22415 SNORA31.18-201ENST00000517043 134 ntBASIC2.13□□□□□ -2.07
USF1P22415 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.13□□□□□ -2.07
USF1P22415 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.13□□□□□ -2.07
USF1P22415 AC243972.3-201ENST00000539655 198 ntBASIC2.13□□□□□ -2.07
USF1P22415 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.13□□□□□ -2.07
USF1P22415 MYL12BP1-201ENST00000569826 507 ntBASIC2.13□□□□□ -2.07
USF1P22415 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.13□□□□□ -2.07
USF1P22415 MIR5092-201ENST00000583139 88 ntBASIC2.13□□□□□ -2.07
USF1P22415 MIR3616-201ENST00000584070 92 ntBASIC2.13□□□□□ -2.07
USF1P22415 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
USF1P22415 AF038458.1-201ENST00000588406 262 ntBASIC2.13□□□□□ -2.07
USF1P22415 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.13□□□□□ -2.07
USF1P22415 AC060766.3-201ENST00000591442 263 ntBASIC2.13□□□□□ -2.07
USF1P22415 AC007938.3-201ENST00000604965 623 ntBASIC2.13□□□□□ -2.07
USF1P22415 MTND4LP5-201ENST00000605152 292 ntBASIC2.13□□□□□ -2.07
USF1P22415 AL049777.1-201ENST00000622740 518 ntBASIC2.13□□□□□ -2.07
USF1P22415 MIR7515-201ENST00000637837 67 ntBASIC2.13□□□□□ -2.07
USF1P22415 AL137003.2-201ENST00000606924 2538 ntBASIC2.13□□□□□ -2.07
USF1P22415 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USF1P22415 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
USF1P22415 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USF1P22415 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.12□□□□□ -2.07
USF1P22415 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USF1P22415 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
USF1P22415 AL139276.1-201ENST00000311910 1001 ntBASIC2.12□□□□□ -2.07
USF1P22415 RNU6-884P-201ENST00000363889 107 ntBASIC2.12□□□□□ -2.07
USF1P22415 SNORA3.2-201ENST00000408221 125 ntBASIC2.12□□□□□ -2.07
USF1P22415 AC009963.1-201ENST00000417265 157 ntBASIC2.12□□□□□ -2.07
USF1P22415 USP9YP20-201ENST00000419224 558 ntBASIC2.12□□□□□ -2.07
USF1P22415 RPS15AP5-201ENST00000436276 388 ntBASIC2.12□□□□□ -2.07
USF1P22415 Z80107.1-201ENST00000436830 412 ntBASIC2.12□□□□□ -2.07
USF1P22415 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.12□□□□□ -2.07
USF1P22415 AC104389.3-201ENST00000445629 235 ntBASIC2.12□□□□□ -2.07
USF1P22415 EEF1E1P1-201ENST00000446998 430 ntBASIC2.12□□□□□ -2.07
USF1P22415 AC133134.1-201ENST00000466800 359 ntBASIC2.12□□□□□ -2.07
USF1P22415 RPS15AP36-201ENST00000492022 382 ntBASIC2.12□□□□□ -2.07
USF1P22415 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.12□□□□□ -2.07
USF1P22415 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.12□□□□□ -2.07
USF1P22415 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.12□□□□□ -2.07
USF1P22415 AC110760.3-202ENST00000515177 371 ntBASIC2.12□□□□□ -2.07
USF1P22415 SCARNA11.3-201ENST00000517276 130 ntBASIC2.12□□□□□ -2.07
USF1P22415 AC109329.2-201ENST00000519658 482 ntBASIC2.12□□□□□ -2.07
USF1P22415 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.12□□□□□ -2.07
USF1P22415 AC100870.1-201ENST00000522035 505 ntBASIC2.12□□□□□ -2.07
USF1P22415 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.12□□□□□ -2.07
USF1P22415 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USF1P22415 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.12□□□□□ -2.07
USF1P22415 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms