Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDGFRAP16234 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.07□□□□□ -1.92
PDGFRAP16234 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC099548.1-201ENST00000421443 426 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC129850.1-201ENST00000436203 508 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 RPL22P17-201ENST00000438729 315 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 UBBP3-201ENST00000445497 241 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.07□□□□□ -1.92
PDGFRAP16234 AC087588.1-201ENST00000462203 316 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AL160314.1-201ENST00000490836 438 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.07□□□□□ -1.92
PDGFRAP16234 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.07□□□□□ -1.92
PDGFRAP16234 RNU6-759P-201ENST00000516740 103 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC025881.1-201ENST00000518851 512 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.07□□□□□ -1.92
PDGFRAP16234 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 ZNF519P3-201ENST00000557158 1032 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC135628.1-201ENST00000568867 534 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.07□□□□□ -1.92
PDGFRAP16234 AC006504.3-201ENST00000586818 523 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC015871.2-201ENST00000603605 948 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC008277.2-201ENST00000605196 797 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC239868.4-201ENST00000608318 671 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC108747.1-201ENST00000609508 535 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AL161629.2-201ENST00000615347 275 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC104010.1-201ENST00000616889 150 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC073308.1-201ENST00000623696 305 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 AC138915.1-201ENST00000565427 1685 ntBASIC3.07□□□□□ -1.92
PDGFRAP16234 RNU6-533P-201ENST00000384144 107 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 MTCYBP36-201ENST00000404146 440 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 RNU2-62P-201ENST00000410868 191 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 HMGN2P30-201ENST00000423237 256 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.06□□□□□ -1.92
PDGFRAP16234 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.06□□□□□ -1.92
PDGFRAP16234 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.06□□□□□ -1.92
PDGFRAP16234 SNORA31.21-201ENST00000517180 77 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.06□□□□□ -1.92
PDGFRAP16234 AC022616.6-201ENST00000520479 119 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AC106038.2-201ENST00000520706 568 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AC087373.1-201ENST00000524920 491 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.06□□□□□ -1.92
PDGFRAP16234 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.06□□□□□ -1.92
PDGFRAP16234 AC090888.1-201ENST00000561335 1141 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
PDGFRAP16234 AC068135.2-201ENST00000569293 1028 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 MIR5697-201ENST00000578045 78 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AC020895.1-201ENST00000595362 272 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AF131215.7-201ENST00000602443 707 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AC121334.2-201ENST00000605387 271 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 uc_338.12-201ENST00000616344 181 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AF246928.1-201ENST00000623768 87 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AC120349.3-201ENST00000624377 529 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AL137790.1-201ENST00000634283 177 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 AC010149.2-201ENST00000637608 315 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PDGFRAP16234 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
PDGFRAP16234 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PDGFRAP16234 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PDGFRAP16234 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PDGFRAP16234 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFRAP16234 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PDGFRAP16234 MTND5P19-201ENST00000424872 1794 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PDGFRAP16234 SNORA9.2-201ENST00000365361 133 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 RNY3P13-201ENST00000365542 102 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 RNU6-140P-201ENST00000384566 108 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFRAP16234 RN7SKP123-201ENST00000410732 291 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 ELOCP17-201ENST00000414751 326 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 USP9YP13-201ENST00000417797 480 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AL645937.1-202ENST00000421799 937 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 ZNF863P-201ENST00000426746 417 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.05□□□□□ -1.92
PDGFRAP16234 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.05□□□□□ -1.92
PDGFRAP16234 EPS15P1-201ENST00000448836 336 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 RPL37P4-201ENST00000448908 268 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AL590365.1-201ENST00000450788 243 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.05□□□□□ -1.92
PDGFRAP16234 MTCO2P6-201ENST00000463134 685 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AP004217.1-201ENST00000480579 346 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 RPF2P2-201ENST00000504693 896 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC010486.2-201ENST00000505572 483 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AF131216.2-201ENST00000512316 564 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.05□□□□□ -1.92
PDGFRAP16234 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFRAP16234 AC107016.2-201ENST00000547968 190 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.05□□□□□ -1.92
PDGFRAP16234 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.05□□□□□ -1.92
PDGFRAP16234 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.05□□□□□ -1.92
PDGFRAP16234 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.05□□□□□ -1.92
PDGFRAP16234 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.05□□□□□ -1.92
PDGFRAP16234 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.05□□□□□ -1.92
PDGFRAP16234 AP001981.2-201ENST00000603241 418 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AL022161.1-201ENST00000604390 213 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms