Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL160236.1-201ENST00000556317 195 ntBASIC6.51□□□□□ -1.37
CD44P16070 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CD44P16070 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.51□□□□□ -1.37
CD44P16070 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.51□□□□□ -1.37
CD44P16070 MIR6721-201ENST00000617181 87 ntBASIC6.51□□□□□ -1.37
CD44P16070 MIR6813-201ENST00000621638 56 ntBASIC6.51□□□□□ -1.37
CD44P16070 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.51□□□□□ -1.37
CD44P16070 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CD44P16070 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.5□□□□□ -1.37
CD44P16070 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.5□□□□□ -1.37
CD44P16070 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.5□□□□□ -1.37
CD44P16070 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.5□□□□□ -1.37
CD44P16070 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.5□□□□□ -1.37
CD44P16070 Y_RNA.52-201ENST00000362760 96 ntBASIC6.5□□□□□ -1.37
CD44P16070 RNU6-1080P-201ENST00000383982 107 ntBASIC6.5□□□□□ -1.37
CD44P16070 RNA5SP91-201ENST00000390902 119 ntBASIC6.5□□□□□ -1.37
CD44P16070 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.5□□□□□ -1.37
CD44P16070 OR2AM1P-201ENST00000422137 422 ntBASIC6.5□□□□□ -1.37
CD44P16070 AC245028.1-201ENST00000423259 256 ntBASIC6.5□□□□□ -1.37
CD44P16070 AKR1B10P1-201ENST00000425765 942 ntBASIC6.5□□□□□ -1.37
CD44P16070 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.5□□□□□ -1.37
CD44P16070 CRIP1P1-201ENST00000427567 185 ntBASIC6.5□□□□□ -1.37
CD44P16070 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.5□□□□□ -1.37
CD44P16070 AC010618.1-201ENST00000469924 477 ntBASIC6.5□□□□□ -1.37
CD44P16070 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 AC099778.2-201ENST00000610904 211 ntBASIC6.5□□□□□ -1.37
CD44P16070 MIR6809-201ENST00000612189 116 ntBASIC6.5□□□□□ -1.37
CD44P16070 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD44P16070 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
CD44P16070 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.49□□□□□ -1.37
CD44P16070 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.49□□□□□ -1.37
CD44P16070 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CD44P16070 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.49□□□□□ -1.37
CD44P16070 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 MAPK10-270ENST00000641102 3538 ntBASIC6.49□□□□□ -1.37
CD44P16070 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CD44P16070 Y_RNA.432-201ENST00000384087 111 ntBASIC6.49□□□□□ -1.37
CD44P16070 SNORA51.9-201ENST00000384295 124 ntBASIC6.49□□□□□ -1.37
CD44P16070 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD44P16070 SNORA48.5-201ENST00000391143 135 ntBASIC6.49□□□□□ -1.37
CD44P16070 RN7SKP17-201ENST00000411242 351 ntBASIC6.49□□□□□ -1.37
CD44P16070 RPS26P42-201ENST00000413485 326 ntBASIC6.49□□□□□ -1.37
CD44P16070 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.49□□□□□ -1.37
CD44P16070 AC097463.1-201ENST00000447288 481 ntBASIC6.49□□□□□ -1.37
CD44P16070 RN7SL568P-201ENST00000493069 298 ntBASIC6.49□□□□□ -1.37
CD44P16070 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.49□□□□□ -1.37
CD44P16070 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.49□□□□□ -1.37
CD44P16070 AC124916.2-201ENST00000604416 224 ntBASIC6.49□□□□□ -1.37
CD44P16070 AC090132.2-201ENST00000615881 347 ntBASIC6.49□□□□□ -1.37
CD44P16070 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD44P16070 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.49□□□□□ -1.37
CD44P16070 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.49□□□□□ -1.37
CD44P16070 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.49□□□□□ -1.37
CD44P16070 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD44P16070 AC025470.1-201ENST00000510053 2032 ntBASIC6.49□□□□□ -1.37
CD44P16070 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD44P16070 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.48□□□□□ -1.37
CD44P16070 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD44P16070 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD44P16070 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CD44P16070 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC6.48□□□□□ -1.37
CD44P16070 RNU6-979P-201ENST00000383896 107 ntBASIC6.48□□□□□ -1.37
CD44P16070 RNU6-484P-201ENST00000384016 107 ntBASIC6.48□□□□□ -1.37
CD44P16070 Y_RNA.437-201ENST00000384113 113 ntBASIC6.48□□□□□ -1.37
CD44P16070 MIR137-201ENST00000385223 102 ntBASIC6.48□□□□□ -1.37
CD44P16070 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC6.48□□□□□ -1.37
CD44P16070 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC6.48□□□□□ -1.37
CD44P16070 AC113367.2-201ENST00000505749 160 ntBASIC6.48□□□□□ -1.37
CD44P16070 IGLV3-30-201ENST00000524362 298 ntBASIC6.48□□□□□ -1.37
CD44P16070 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.48□□□□□ -1.37
CD44P16070 MIR5010-201ENST00000582846 120 ntBASIC6.48□□□□□ -1.37
CD44P16070 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.48□□□□□ -1.37
CD44P16070 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD44P16070 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.48□□□□□ -1.37
CD44P16070 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD44P16070 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CD44P16070 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.48□□□□□ -1.37
CD44P16070 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CD44P16070 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CD44P16070 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC6.48□□□□□ -1.37
CD44P16070 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD44P16070 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.48□□□□□ -1.37
CD44P16070 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.48□□□□□ -1.37
CD44P16070 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms