Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC009161.2-201ENST00000624626 138 ntBASIC3.39□□□□□ -1.87
PCNAP12004 MIR4275-201ENST00000636486 87 ntBASIC3.39□□□□□ -1.87
PCNAP12004 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.39□□□□□ -1.87
PCNAP12004 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
PCNAP12004 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCNAP12004 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCNAP12004 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCNAP12004 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
PCNAP12004 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCNAP12004 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCNAP12004 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCNAP12004 RNA5SP124-201ENST00000362739 110 ntBASIC3.38□□□□□ -1.87
PCNAP12004 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PCNAP12004 MIR554-201ENST00000384874 96 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AL445189.1-201ENST00000405722 338 ntBASIC3.38□□□□□ -1.87
PCNAP12004 U3.42-201ENST00000408746 214 ntBASIC3.38□□□□□ -1.87
PCNAP12004 RNA5SP293-201ENST00000410527 113 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.38□□□□□ -1.87
PCNAP12004 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCNAP12004 AL451054.2-201ENST00000420896 202 ntBASIC3.38□□□□□ -1.87
PCNAP12004 RPL7P46-201ENST00000425129 740 ntBASIC3.38□□□□□ -1.87
PCNAP12004 MED13P1-201ENST00000428342 171 ntBASIC3.38□□□□□ -1.87
PCNAP12004 RPS20P5-201ENST00000434808 360 ntBASIC3.38□□□□□ -1.87
PCNAP12004 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.38□□□□□ -1.87
PCNAP12004 SNORD97-201ENST00000459187 142 ntBASIC3.38□□□□□ -1.87
PCNAP12004 RN7SL594P-201ENST00000470590 287 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC079382.1-201ENST00000493346 557 ntBASIC3.38□□□□□ -1.87
PCNAP12004 HSPD1P15-201ENST00000505573 1122 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC105914.1-201ENST00000511798 226 ntBASIC3.38□□□□□ -1.87
PCNAP12004 Y_RNA.704-201ENST00000516851 102 ntBASIC3.38□□□□□ -1.87
PCNAP12004 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.38□□□□□ -1.87
PCNAP12004 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.38□□□□□ -1.87
PCNAP12004 OR5G4P-201ENST00000525251 760 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AP006587.4-201ENST00000526053 529 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AP001893.2-201ENST00000526949 202 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC004024.1-201ENST00000549244 247 ntBASIC3.38□□□□□ -1.87
PCNAP12004 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.38□□□□□ -1.87
PCNAP12004 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.38□□□□□ -1.87
PCNAP12004 AC055876.1-202ENST00000567053 138 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AP001029.3-201ENST00000588063 596 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC007363.1-201ENST00000604736 620 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC019176.2-201ENST00000611579 315 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC090132.2-201ENST00000615881 347 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC073534.2-201ENST00000620377 381 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AL357559.1-201ENST00000622228 274 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC139792.3-201ENST00000623525 224 ntBASIC3.38□□□□□ -1.87
PCNAP12004 AC093648.1-201ENST00000623546 606 ntBASIC3.38□□□□□ -1.87
PCNAP12004 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.38□□□□□ -1.87
PCNAP12004 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.38□□□□□ -1.87
PCNAP12004 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCNAP12004 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCNAP12004 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCNAP12004 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.37□□□□□ -1.87
PCNAP12004 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCNAP12004 OR4G2P-201ENST00000328113 903 ntBASIC3.37□□□□□ -1.87
PCNAP12004 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
PCNAP12004 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCNAP12004 RNU1-101P-201ENST00000391171 127 ntBASIC3.37□□□□□ -1.87
PCNAP12004 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCNAP12004 RNU2-39P-201ENST00000410604 198 ntBASIC3.37□□□□□ -1.87
PCNAP12004 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
PCNAP12004 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 UBE2D3P2-201ENST00000424409 445 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AC007389.2-201ENST00000434630 306 ntBASIC3.37□□□□□ -1.87
PCNAP12004 HMGB3P12-201ENST00000438745 556 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AC079781.2-201ENST00000446424 169 ntBASIC3.37□□□□□ -1.87
PCNAP12004 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.37□□□□□ -1.87
PCNAP12004 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 RPS20P20-201ENST00000460498 340 ntBASIC3.37□□□□□ -1.87
PCNAP12004 RN7SL432P-201ENST00000484057 298 ntBASIC3.37□□□□□ -1.87
PCNAP12004 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 AC019235.1-201ENST00000503847 207 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCNAP12004 AL359273.1-201ENST00000510918 627 ntBASIC3.37□□□□□ -1.87
PCNAP12004 TTC39CP1-201ENST00000512513 755 ntBASIC3.37□□□□□ -1.87
PCNAP12004 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
PCNAP12004 RNU1-128P-201ENST00000516704 160 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 AC023632.4-201ENST00000517783 191 ntBASIC3.37□□□□□ -1.87
PCNAP12004 MTND4LP26-201ENST00000518144 282 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.37□□□□□ -1.87
PCNAP12004 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.37□□□□□ -1.87
PCNAP12004 AP006245.1-201ENST00000522549 120 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AP003072.2-201ENST00000527756 676 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AP001646.1-201ENST00000527936 915 ntBASIC3.37□□□□□ -1.87
PCNAP12004 OR5B19P-201ENST00000531766 928 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.37□□□□□ -1.87
PCNAP12004 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 AC067852.3-201ENST00000589177 561 ntBASIC3.37□□□□□ -1.87
PCNAP12004 AP003465.2-201ENST00000602571 373 ntBASIC3.37□□□□□ -1.87
PCNAP12004 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.37□□□□□ -1.87
PCNAP12004 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.37□□□□□ -1.87
PCNAP12004 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms