Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC023538.1-201ENST00000534576 736 ntBASIC2.75□□□□□ -1.97
TOP1P11387 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.75□□□□□ -1.97
TOP1P11387 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.75□□□□□ -1.97
TOP1P11387 TRAV28-201ENST00000557548 323 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AC090888.2-201ENST00000559765 1144 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AC027807.1-201ENST00000559921 996 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.75□□□□□ -1.97
TOP1P11387 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.75□□□□□ -1.97
TOP1P11387 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.75□□□□□ -1.97
TOP1P11387 AP001429.1-201ENST00000602568 530 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AC022022.2-201ENST00000602989 360 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AL355877.2-201ENST00000603670 358 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AC025588.2-201ENST00000604851 466 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AC087683.2-201ENST00000611384 326 ntBASIC2.75□□□□□ -1.97
TOP1P11387 RN7SL853P-201ENST00000617250 223 ntBASIC2.75□□□□□ -1.97
TOP1P11387 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TOP1P11387 AC064859.1-201ENST00000624741 174 ntBASIC2.75□□□□□ -1.97
TOP1P11387 AC006927.4-201ENST00000639187 543 ntBASIC2.75□□□□□ -1.97
TOP1P11387 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
TOP1P11387 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
TOP1P11387 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
TOP1P11387 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TOP1P11387 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TOP1P11387 ZNF876P-202ENST00000398732 1485 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AC005539.1-201ENST00000443768 1479 ntBASIC2.74□□□□□ -1.97
TOP1P11387 Z99496.1-201ENST00000469424 1477 ntBASIC2.74□□□□□ -1.97
TOP1P11387 SNORD113-6-201ENST00000363345 75 ntBASIC2.74□□□□□ -1.97
TOP1P11387 Y_RNA.192-201ENST00000363977 102 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AL590084.1-201ENST00000407885 387 ntBASIC2.74□□□□□ -1.97
TOP1P11387 VPS26BP1-201ENST00000417155 755 ntBASIC2.74□□□□□ -1.97
TOP1P11387 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.74□□□□□ -1.97
TOP1P11387 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.74□□□□□ -1.97
TOP1P11387 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.74□□□□□ -1.97
TOP1P11387 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.74□□□□□ -1.97
TOP1P11387 PPP1R11P2-201ENST00000423543 382 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AC092447.3-201ENST00000426027 686 ntBASIC2.74□□□□□ -1.97
TOP1P11387 USP9YP22-201ENST00000438971 294 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AL049734.2-201ENST00000441066 616 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.74□□□□□ -1.97
TOP1P11387 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.74□□□□□ -1.97
TOP1P11387 AC008549.1-201ENST00000512900 643 ntBASIC2.74□□□□□ -1.97
TOP1P11387 RNA5SP281-201ENST00000516504 135 ntBASIC2.74□□□□□ -1.97
TOP1P11387 ATP5F1P5-201ENST00000526403 760 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.74□□□□□ -1.97
TOP1P11387 AC138915.2-201ENST00000569776 97 ntBASIC2.74□□□□□ -1.97
TOP1P11387 MIR5194-201ENST00000582634 120 ntBASIC2.74□□□□□ -1.97
TOP1P11387 MIR5007-201ENST00000583098 95 ntBASIC2.74□□□□□ -1.97
TOP1P11387 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
TOP1P11387 AL645944.1-201ENST00000603857 493 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AL049779.4-201ENST00000604500 156 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AL161729.4-201ENST00000604650 476 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AC007349.4-201ENST00000608114 532 ntBASIC2.74□□□□□ -1.97
TOP1P11387 AC013412.1-201ENST00000610687 192 ntBASIC2.74□□□□□ -1.97
TOP1P11387 FO624990.1-201ENST00000636373 85 ntBASIC2.74□□□□□ -1.97
TOP1P11387 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.74□□□□□ -1.97
TOP1P11387 SNRPEP3-201ENST00000338402 276 ntBASIC2.73□□□□□ -1.97
TOP1P11387 MIR21-201ENST00000362134 72 ntBASIC2.73□□□□□ -1.97
TOP1P11387 SNORD114-30-201ENST00000364448 72 ntBASIC2.73□□□□□ -1.97
TOP1P11387 RN7SKP226-201ENST00000364912 300 ntBASIC2.73□□□□□ -1.97
TOP1P11387 SNORA3.2-201ENST00000408221 125 ntBASIC2.73□□□□□ -1.97
TOP1P11387 HIGD1AP15-201ENST00000416198 280 ntBASIC2.73□□□□□ -1.97
TOP1P11387 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TOP1P11387 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.73□□□□□ -1.97
TOP1P11387 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.73□□□□□ -1.97
TOP1P11387 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.73□□□□□ -1.97
TOP1P11387 BNIP3P2-201ENST00000441221 577 ntBASIC2.73□□□□□ -1.97
TOP1P11387 RPL32P28-201ENST00000443577 397 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TOP1P11387 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.73□□□□□ -1.97
TOP1P11387 AP1S2P1-201ENST00000457344 379 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.73□□□□□ -1.97
TOP1P11387 AC073901.1-201ENST00000462471 408 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.73□□□□□ -1.97
TOP1P11387 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.73□□□□□ -1.97
TOP1P11387 RNU6-1225P-201ENST00000516336 65 ntBASIC2.73□□□□□ -1.97
TOP1P11387 RNU1-104P-201ENST00000517280 175 ntBASIC2.73□□□□□ -1.97
TOP1P11387 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.73□□□□□ -1.97
TOP1P11387 AC026407.1-201ENST00000518369 204 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.73□□□□□ -1.97
TOP1P11387 AC022861.1-201ENST00000522981 663 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.73□□□□□ -1.97
TOP1P11387 AC090615.1-201ENST00000577519 154 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC022662.1-201ENST00000580252 331 ntBASIC2.73□□□□□ -1.97
TOP1P11387 BNIP3P26-201ENST00000600827 554 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC021749.1-201ENST00000604322 607 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC080013.3-201ENST00000606839 578 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC005332.6-201ENST00000613178 446 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AC109809.1-201ENST00000619665 545 ntBASIC2.73□□□□□ -1.97
TOP1P11387 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.73□□□□□ -1.97
TOP1P11387 OR4G2P-202ENST00000641004 1759 ntBASIC2.73□□□□□ -1.97
TOP1P11387 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TOP1P11387 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TOP1P11387 MTCO1P9-201ENST00000505577 1534 ntBASIC2.73□□□□□ -1.97
TOP1P11387 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TOP1P11387 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
TOP1P11387 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TOP1P11387 AL356473.1-201ENST00000406203 1408 ntBASIC2.72□□□□□ -1.97
TOP1P11387 RNU2-42P-201ENST00000410697 113 ntBASIC2.72□□□□□ -1.97
TOP1P11387 AC068533.2-201ENST00000411872 306 ntBASIC2.72□□□□□ -1.97
TOP1P11387 AC007064.1-201ENST00000412238 351 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms