Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC6P09630 MTND3P23-201ENST00000431980 347 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 USP12PX-201ENST00000432383 1057 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RPS15AP9-201ENST00000439856 381 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC092001.1-201ENST00000453012 261 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC6P09630 AP1S2P1-201ENST00000457344 379 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RNU6-420P-201ENST00000458780 107 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RPL21P8-201ENST00000465083 535 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RPL21P103-201ENST00000479921 488 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC055855.1-201ENST00000489563 579 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC091951.2-201ENST00000500762 203 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RNF138P1-201ENST00000502765 546 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC6P09630 MTCO3P44-201ENST00000510977 541 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AP001646.1-201ENST00000527936 915 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC6P09630 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC6P09630 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC060771.1-201ENST00000582031 164 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC6P09630 AC007363.1-201ENST00000604736 620 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC025253.1-201ENST00000613623 543 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC063943.3-201ENST00000615562 356 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC007998.5-201ENST00000622938 237 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC112204.3-201ENST00000623822 332 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 CR381572.1-201ENST00000625098 102 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC6P09630 AC138915.3-201ENST00000562908 1389 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC6P09630 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXC6P09630 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 AC000403.1-201ENST00000613696 3585 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC6P09630 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC6P09630 RNU6-97P-201ENST00000363387 104 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 SNORA71.1-201ENST00000364523 117 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 RNU6-169P-201ENST00000365336 107 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 SNORA20.2-201ENST00000383922 131 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 Y_RNA.573-201ENST00000384763 105 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC6P09630 MTND4LP20-201ENST00000402379 270 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 RNU2-15P-201ENST00000410692 191 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 RPS15AP12-201ENST00000419498 388 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AL139132.1-201ENST00000431587 344 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 RPL23AP30-201ENST00000432419 501 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC6P09630 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 RPL7P54-201ENST00000438336 674 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 MTCO3P18-201ENST00000440206 761 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 USP9YP8-201ENST00000441913 500 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 AL354685.2-201ENST00000448218 1447 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXC6P09630 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC6P09630 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC6P09630 snoU13.8-201ENST00000458890 104 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 RPS29P25-201ENST00000481709 171 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HOXC6P09630 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC6P09630 AC021146.1-201ENST00000511202 716 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 RNU6-1281P-201ENST00000516223 105 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 RN7SKP277-201ENST00000516895 283 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AC009812.2-201ENST00000517657 457 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC6P09630 NDUFB9P3-201ENST00000521269 501 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 OR4P1P-201ENST00000530808 1136 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC6P09630 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC6P09630 AL365361.1-201ENST00000566942 3481 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AC090616.5-202ENST00000582111 297 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC6P09630 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC6P09630 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC6P09630 BNIP3P9-201ENST00000603714 553 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AC025449.1-201ENST00000603896 529 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 Z84480.1-201ENST00000605131 311 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AC093788.1-201ENST00000609356 927 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AL356585.4-201ENST00000623078 1229 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 AC009033.1-201ENST00000624279 431 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 MIR3662-201ENST00000637030 95 ntBASIC3.57□□□□□ -1.84
HOXC6P09630 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC6P09630 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms