Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPS27AP10-201ENST00000496103 208 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AC096571.1-202ENST00000506634 735 ntBASIC2.22□□□□□ -2.05
TPM1P09493 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM1P09493 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.22□□□□□ -2.05
TPM1P09493 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM1P09493 AC079148.1-201ENST00000565944 819 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AC002545.1-201ENST00000592511 181 ntBASIC2.22□□□□□ -2.05
TPM1P09493 DNAJC19P3-201ENST00000594491 331 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AC003001.2-201ENST00000616294 831 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AL157770.1-201ENST00000623049 439 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AP003400.5-201ENST00000624827 617 ntBASIC2.22□□□□□ -2.05
TPM1P09493 ELF2P3-201ENST00000445099 1506 ntBASIC2.22□□□□□ -2.05
TPM1P09493 RN7SKP158-201ENST00000410453 326 ntBASIC2.21□□□□□ -2.06
TPM1P09493 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
TPM1P09493 NDUFS5P4-201ENST00000412983 318 ntBASIC2.21□□□□□ -2.06
TPM1P09493 DPRXP1-201ENST00000426312 460 ntBASIC2.21□□□□□ -2.06
TPM1P09493 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM1P09493 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM1P09493 MTND5P30-201ENST00000452896 1731 ntBASIC2.21□□□□□ -2.06
TPM1P09493 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
TPM1P09493 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TPM1P09493 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
TPM1P09493 RNU2-44P-201ENST00000516795 194 ntBASIC2.21□□□□□ -2.06
TPM1P09493 RNU2-19P-201ENST00000517288 84 ntBASIC2.21□□□□□ -2.06
TPM1P09493 MTCO1P4-201ENST00000520516 1409 ntBASIC2.21□□□□□ -2.06
TPM1P09493 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.21□□□□□ -2.06
TPM1P09493 BNIP3P33-201ENST00000598912 569 ntBASIC2.21□□□□□ -2.06
TPM1P09493 AL138478.1-201ENST00000612252 832 ntBASIC2.21□□□□□ -2.06
TPM1P09493 AC024257.5-201ENST00000612739 531 ntBASIC2.21□□□□□ -2.06
TPM1P09493 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TPM1P09493 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TPM1P09493 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.21□□□□□ -2.06
TPM1P09493 AL354685.2-201ENST00000448218 1447 ntBASIC2.2□□□□□ -2.06
TPM1P09493 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TPM1P09493 RNA5SP387-201ENST00000364226 106 ntBASIC2.2□□□□□ -2.06
TPM1P09493 U3.12-201ENST00000364498 214 ntBASIC2.2□□□□□ -2.06
TPM1P09493 SNORA23-201ENST00000365128 182 ntBASIC2.2□□□□□ -2.06
TPM1P09493 U6atac.2-201ENST00000408644 118 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM1P09493 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.2□□□□□ -2.06
TPM1P09493 RPS3AP44-201ENST00000425466 790 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AC027124.2-201ENST00000428249 105 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM1P09493 AC093155.1-201ENST00000440164 826 ntBASIC2.2□□□□□ -2.06
TPM1P09493 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.2□□□□□ -2.06
TPM1P09493 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.2□□□□□ -2.06
TPM1P09493 TRBV1-201ENST00000476502 284 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM1P09493 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TPM1P09493 AC026616.1-201ENST00000523157 525 ntBASIC2.2□□□□□ -2.06
TPM1P09493 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM1P09493 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM1P09493 AC122134.1-202ENST00000569111 1201 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AC024619.4-201ENST00000580924 316 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AC105245.1-201ENST00000581934 244 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AC007229.1-201ENST00000590455 412 ntBASIC2.2□□□□□ -2.06
TPM1P09493 AC239868.4-201ENST00000608318 671 ntBASIC2.2□□□□□ -2.06
TPM1P09493 SDR42E1P2-201ENST00000614861 481 ntBASIC2.2□□□□□ -2.06
TPM1P09493 SDR42E1P4-201ENST00000620894 481 ntBASIC2.2□□□□□ -2.06
TPM1P09493 PISRT1-201ENST00000626175 531 ntBASIC2.2□□□□□ -2.06
TPM1P09493 Y_RNA.234-201ENST00000364409 97 ntBASIC2.19□□□□□ -2.06
TPM1P09493 RNU1-39P-201ENST00000383897 165 ntBASIC2.19□□□□□ -2.06
TPM1P09493 RNU6-637P-201ENST00000384050 107 ntBASIC2.19□□□□□ -2.06
TPM1P09493 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TPM1P09493 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.19□□□□□ -2.06
TPM1P09493 AL451054.2-201ENST00000420896 202 ntBASIC2.19□□□□□ -2.06
TPM1P09493 BX276092.3-201ENST00000424182 230 ntBASIC2.19□□□□□ -2.06
TPM1P09493 SEPT7P5-201ENST00000434048 306 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.19□□□□□ -2.06
TPM1P09493 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.19□□□□□ -2.06
TPM1P09493 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM1P09493 AL353718.1-201ENST00000451028 517 ntBASIC2.19□□□□□ -2.06
TPM1P09493 snoU13.8-201ENST00000458890 104 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM1P09493 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM1P09493 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.19□□□□□ -2.06
TPM1P09493 AC114981.1-201ENST00000503897 678 ntBASIC2.19□□□□□ -2.06
TPM1P09493 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM1P09493 AC114781.4-201ENST00000513707 639 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.19□□□□□ -2.06
TPM1P09493 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM1P09493 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM1P09493 AC118273.2-201ENST00000532092 465 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AC026464.5-201ENST00000562497 722 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.19□□□□□ -2.06
TPM1P09493 AC012467.1-201ENST00000607740 256 ntBASIC2.19□□□□□ -2.06
TPM1P09493 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.19□□□□□ -2.06
TPM1P09493 U4atac.1-201ENST00000618345 95 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AC010378.1-201ENST00000619270 362 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AL138713.1-201ENST00000624026 2130 ntBASIC2.19□□□□□ -2.06
TPM1P09493 AC120349.2-201ENST00000625002 298 ntBASIC2.19□□□□□ -2.06
TPM1P09493 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.19□□□□□ -2.06
TPM1P09493 HPVC1-201ENST00000629899 1198 ntBASIC2.19□□□□□ -2.06
TPM1P09493 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TPM1P09493 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.19□□□□□ -2.06
TPM1P09493 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.18□□□□□ -2.06
TPM1P09493 AC011477.1-204ENST00000623416 1325 ntBASIC2.18□□□□□ -2.06
TPM1P09493 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.18□□□□□ -2.06
TPM1P09493 RNA5SP289-201ENST00000362332 137 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms