Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC1P07992 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ERCC1P07992 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.25□□□□□ -2.05
ERCC1P07992 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC1P07992 AL606834.3-201ENST00000602615 496 ntBASIC2.25□□□□□ -2.05
ERCC1P07992 AC090186.1-201ENST00000605991 572 ntBASIC2.25□□□□□ -2.05
ERCC1P07992 AC104237.2-201ENST00000612456 443 ntBASIC2.25□□□□□ -2.05
ERCC1P07992 AL589743.7-201ENST00000612637 233 ntBASIC2.25□□□□□ -2.05
ERCC1P07992 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC1P07992 AC010149.2-201ENST00000637608 315 ntBASIC2.25□□□□□ -2.05
ERCC1P07992 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC1P07992 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ERCC1P07992 LINC02211-204ENST00000642024 1070 ntBASIC2.25□□□□□ -2.05
ERCC1P07992 ELF2P3-201ENST00000445099 1506 ntBASIC2.25□□□□□ -2.05
ERCC1P07992 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ERCC1P07992 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ERCC1P07992 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ERCC1P07992 Y_RNA.245-201ENST00000364493 95 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 RNU6-920P-201ENST00000410926 92 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 RPLP0P7-201ENST00000416050 667 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.24□□□□□ -2.05
ERCC1P07992 MICF-203ENST00000432679 129 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.24□□□□□ -2.05
ERCC1P07992 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.24□□□□□ -2.05
ERCC1P07992 AL139109.1-201ENST00000455491 297 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.24□□□□□ -2.05
ERCC1P07992 AC126389.1-201ENST00000477436 290 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 RPS15AP36-201ENST00000492022 382 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.24□□□□□ -2.05
ERCC1P07992 AC118465.1-201ENST00000513820 1271 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 RNA5SP24-201ENST00000516478 95 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
ERCC1P07992 NACAP3-201ENST00000552100 481 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 AC007151.1-201ENST00000572774 483 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 AC004805.2-201ENST00000605382 482 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 AC005332.10-201ENST00000612725 619 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.24□□□□□ -2.05
ERCC1P07992 AC011890.2-201ENST00000613393 294 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 MIR6817-201ENST00000615588 66 ntBASIC2.24□□□□□ -2.05
ERCC1P07992 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ERCC1P07992 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.24□□□□□ -2.05
ERCC1P07992 AC004944.1-201ENST00000517807 3059 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ERCC1P07992 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 MIR449A-201ENST00000362113 91 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 RNU6-289P-201ENST00000364093 107 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 RNU6-621P-201ENST00000364752 109 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 Y_RNA.311-201ENST00000365068 96 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 AL449283.1-202ENST00000418249 604 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 USP9YP20-201ENST00000419224 558 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 ELOCP14-201ENST00000428070 331 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ERCC1P07992 ELOCP7-201ENST00000439968 331 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 ZNF886P-201ENST00000450781 723 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 CACYBPP2-201ENST00000453625 678 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.23□□□□□ -2.05
ERCC1P07992 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.23□□□□□ -2.05
ERCC1P07992 MTND1P16-201ENST00000465177 898 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.23□□□□□ -2.05
ERCC1P07992 MTND5P13-201ENST00000513046 1079 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 RNU6-927P-201ENST00000516199 100 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 RNA5SP282-201ENST00000516355 108 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 SNORA31.11-201ENST00000516528 139 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.23□□□□□ -2.05
ERCC1P07992 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.23□□□□□ -2.05
ERCC1P07992 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.23□□□□□ -2.05
ERCC1P07992 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.23□□□□□ -2.05
ERCC1P07992 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 U4.3-201ENST00000621047 82 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 AL138955.1-201ENST00000622881 1040 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 AP002791.1-201ENST00000623291 381 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 CU459211.1-201ENST00000635667 749 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 MIR7157-201ENST00000635801 60 ntBASIC2.23□□□□□ -2.05
ERCC1P07992 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ERCC1P07992 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
ERCC1P07992 RNA5SP68-201ENST00000363885 119 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 RNU1-73P-201ENST00000383971 164 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.22□□□□□ -2.05
ERCC1P07992 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.22□□□□□ -2.05
ERCC1P07992 AL513328.1-201ENST00000446460 224 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 PAXBP1P1-201ENST00000449315 447 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 ANKRD26P4-201ENST00000455755 950 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AC008481.1-201ENST00000463278 396 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AL121769.1-201ENST00000469473 401 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 RNU6-276P-201ENST00000516114 96 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.22□□□□□ -2.05
ERCC1P07992 AC023538.1-201ENST00000534576 736 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.22□□□□□ -2.05
ERCC1P07992 MIR3199-1-201ENST00000582434 88 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.22□□□□□ -2.05
ERCC1P07992 AL391813.1-201ENST00000603098 260 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AC025588.2-201ENST00000604851 466 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.22□□□□□ -2.05
ERCC1P07992 AL121895.2-201ENST00000619558 447 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 AC025034.2-201ENST00000623264 286 ntBASIC2.22□□□□□ -2.05
ERCC1P07992 MIR3199-2-201ENST00000636243 86 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms