Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP000907.2-201ENST00000530827 353 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AP000873.5-201ENST00000533906 236 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC135279.1-201ENST00000543493 504 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 CCNG2P1-201ENST00000549521 1000 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC024909.2-201ENST00000553035 286 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 RPL21P5-201ENST00000554662 472 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AL356432.3-201ENST00000568952 465 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 AC103591.3-201ENST00000608684 209 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND1P03886 AC004696.1-201ENST00000614345 607 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 MIR7975-201ENST00000619350 68 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC009268.2-201ENST00000621925 457 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC073308.1-201ENST00000623696 305 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC110079.1-202ENST00000635213 138 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 AC068137.4-201ENST00000638485 296 ntBASIC2.78□□□□□ -1.96
MT-ND1P03886 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND1P03886 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND1P03886 AC007785.2-201ENST00000598627 1916 ntBASIC2.78□□□□□ -1.97
MT-ND1P03886 AC022336.2-201ENST00000568966 2538 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND1P03886 Y_RNA.194-201ENST00000363985 102 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 MIR325-201ENST00000385260 98 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 CDK8P2-201ENST00000415020 547 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 Z85995.1-201ENST00000415547 335 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AL589872.1-201ENST00000426602 288 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 AC005300.1-201ENST00000428401 373 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND1P03886 AC006028.1-201ENST00000438379 402 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND1P03886 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND1P03886 PRDX3P3-201ENST00000447765 522 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 RPS26P21-201ENST00000475397 348 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 ARL2BPP4-201ENST00000506854 471 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND1P03886 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 RNU2-46P-201ENST00000517038 113 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 SNORA31.26-201ENST00000517250 137 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 RNU6-840P-201ENST00000517275 65 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND1P03886 HMGN1P28-201ENST00000521340 364 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND1P03886 MIR3611-201ENST00000584484 83 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND1P03886 AC020895.1-201ENST00000595362 272 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 BNIP3P8-201ENST00000597863 560 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND1P03886 AL606834.2-201ENST00000602954 668 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 SEPT7P9-203ENST00000604116 343 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC245389.1-201ENST00000605141 529 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC098614.4-201ENST00000607601 462 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC091304.9-201ENST00000612091 226 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC013476.2-201ENST00000614456 459 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AL603758.1-201ENST00000618654 241 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC091953.2-201ENST00000623979 160 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC092656.1-203ENST00000624134 423 ntBASIC2.77□□□□□ -1.97
MT-ND1P03886 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND1P03886 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND1P03886 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND1P03886 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND1P03886 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND1P03886 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND1P03886 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND1P03886 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND1P03886 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
MT-ND1P03886 RNU1-105P-201ENST00000363470 161 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RNU4-1-201ENST00000363925 141 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RNU6-270P-201ENST00000364131 105 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RNU6-754P-201ENST00000391166 107 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL031121.1-201ENST00000406553 254 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RNU6-516P-201ENST00000411381 104 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RPS3AP3-201ENST00000411933 242 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 MTND1P21-201ENST00000412991 285 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AL353678.1-201ENST00000422735 741 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AC005326.1-201ENST00000429197 123 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 MTND6P13-201ENST00000443510 523 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RPL21P133-201ENST00000443666 476 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RPL37P4-201ENST00000448908 268 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND1P03886 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND1P03886 SSXP1-201ENST00000453640 473 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL033528.1-201ENST00000453780 140 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms