Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SIX6O95475 AC109464.2-201ENST00000510242 943 ntBASIC1.04□□□□□ -2.24
SIX6O95475 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.04□□□□□ -2.24
SIX6O95475 RNU6-27P-201ENST00000516146 107 ntBASIC1.04□□□□□ -2.24
SIX6O95475 snoZ278.1-201ENST00000517059 112 ntBASIC1.04□□□□□ -2.24
SIX6O95475 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.04□□□□□ -2.24
SIX6O95475 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.04□□□□□ -2.24
SIX6O95475 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.04□□□□□ -2.24
SIX6O95475 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.04□□□□□ -2.24
SIX6O95475 AC023813.2-201ENST00000564321 469 ntBASIC1.04□□□□□ -2.24
SIX6O95475 AL078605.1-201ENST00000603529 500 ntBASIC1.04□□□□□ -2.24
SIX6O95475 AC091834.1-201ENST00000614543 472 ntBASIC1.04□□□□□ -2.24
SIX6O95475 U4atac.1-201ENST00000618345 95 ntBASIC1.04□□□□□ -2.24
SIX6O95475 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.04□□□□□ -2.24
SIX6O95475 AL049641.1-201ENST00000441055 1948 ntBASIC1.04□□□□□ -2.24
SIX6O95475 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SIX6O95475 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.03□□□□□ -2.24
SIX6O95475 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.03□□□□□ -2.24
SIX6O95475 MIR649-201ENST00000384843 97 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AL356421.1-201ENST00000403255 413 ntBASIC1.03□□□□□ -2.24
SIX6O95475 RNU6-174P-201ENST00000410406 106 ntBASIC1.03□□□□□ -2.24
SIX6O95475 RNU2-49P-201ENST00000410666 184 ntBASIC1.03□□□□□ -2.24
SIX6O95475 Z93242.1-201ENST00000427102 353 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC068135.1-201ENST00000446164 246 ntBASIC1.03□□□□□ -2.24
SIX6O95475 RNU1-123P-201ENST00000458950 160 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC080013.2-201ENST00000460866 323 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC068587.2-201ENST00000478386 781 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.03□□□□□ -2.24
SIX6O95475 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.03□□□□□ -2.24
SIX6O95475 HAUS1P3-201ENST00000523909 662 ntBASIC1.03□□□□□ -2.24
SIX6O95475 TRAV11-201ENST00000539512 339 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.03□□□□□ -2.24
SIX6O95475 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.03□□□□□ -2.24
SIX6O95475 SEPT7P9-203ENST00000604116 343 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC013553.2-201ENST00000604244 589 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AL645939.4-201ENST00000604495 135 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.03□□□□□ -2.24
SIX6O95475 AL137246.1-201ENST00000607072 977 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.03□□□□□ -2.24
SIX6O95475 AC069294.1-201ENST00000608397 350 ntBASIC1.03□□□□□ -2.24
SIX6O95475 MIR6845-201ENST00000613182 61 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AC090132.2-201ENST00000615881 347 ntBASIC1.03□□□□□ -2.24
SIX6O95475 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.03□□□□□ -2.24
SIX6O95475 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SIX6O95475 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.03□□□□□ -2.24
SIX6O95475 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.25
SIX6O95475 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SIX6O95475 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.02□□□□□ -2.25
SIX6O95475 MIR421-201ENST00000365696 85 ntBASIC1.02□□□□□ -2.25
SIX6O95475 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SIX6O95475 RNU6-921P-201ENST00000384361 107 ntBASIC1.02□□□□□ -2.25
SIX6O95475 HMGN2P39-201ENST00000398005 273 ntBASIC1.02□□□□□ -2.25
SIX6O95475 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
SIX6O95475 RNA5SP508-201ENST00000411327 119 ntBASIC1.02□□□□□ -2.25
SIX6O95475 MTND5P31-201ENST00000419366 1374 ntBASIC1.02□□□□□ -2.25
SIX6O95475 PAICSP7-201ENST00000419829 962 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.02□□□□□ -2.25
SIX6O95475 AL590383.1-201ENST00000428602 75 ntBASIC1.02□□□□□ -2.25
SIX6O95475 RPS15AP5-201ENST00000436276 388 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.02□□□□□ -2.25
SIX6O95475 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.02□□□□□ -2.25
SIX6O95475 MTCO1P48-201ENST00000448024 1096 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC006390.1-201ENST00000508068 283 ntBASIC1.02□□□□□ -2.25
SIX6O95475 LTV1P1-201ENST00000510683 1237 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.02□□□□□ -2.25
SIX6O95475 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.02□□□□□ -2.25
SIX6O95475 GNAI2P1-201ENST00000541815 315 ntBASIC1.02□□□□□ -2.25
SIX6O95475 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.02□□□□□ -2.25
SIX6O95475 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.02□□□□□ -2.25
SIX6O95475 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.02□□□□□ -2.25
SIX6O95475 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.02□□□□□ -2.25
SIX6O95475 SUMO2P14-201ENST00000604488 293 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC008498.1-201ENST00000613012 531 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC104763.3-201ENST00000613765 618 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC097655.1-201ENST00000635075 318 ntBASIC1.02□□□□□ -2.25
SIX6O95475 AC010149.2-201ENST00000637608 315 ntBASIC1.02□□□□□ -2.25
SIX6O95475 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SIX6O95475 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SIX6O95475 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.01□□□□□ -2.25
SIX6O95475 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
SIX6O95475 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SIX6O95475 RNU1-72P-201ENST00000362976 153 ntBASIC1.01□□□□□ -2.25
SIX6O95475 U3.13-201ENST00000364804 214 ntBASIC1.01□□□□□ -2.25
SIX6O95475 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SIX6O95475 U8.13-201ENST00000390842 128 ntBASIC1.01□□□□□ -2.25
SIX6O95475 RNU6-750P-201ENST00000390946 107 ntBASIC1.01□□□□□ -2.25
SIX6O95475 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SIX6O95475 RPL30P13-201ENST00000418873 348 ntBASIC1.01□□□□□ -2.25
SIX6O95475 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.01□□□□□ -2.25
SIX6O95475 MRPS17P3-201ENST00000465453 385 ntBASIC1.01□□□□□ -2.25
SIX6O95475 PABPC1P3-201ENST00000469174 459 ntBASIC1.01□□□□□ -2.25
SIX6O95475 AC138853.1-201ENST00000503549 823 ntBASIC1.01□□□□□ -2.25
SIX6O95475 AC098591.2-201ENST00000510152 315 ntBASIC1.01□□□□□ -2.25
SIX6O95475 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.01□□□□□ -2.25
SIX6O95475 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.01□□□□□ -2.25
SIX6O95475 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
SIX6O95475 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.01□□□□□ -2.25
SIX6O95475 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.01□□□□□ -2.25
SIX6O95475 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.01□□□□□ -2.25
SIX6O95475 MIR4435-1-201ENST00000582552 80 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms