Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RNU6-1282P-201ENST00000516735 96 ntBASIC4.47□□□□□ -1.69
CLSTN1O94985 SUMO2P20-201ENST00000520803 283 ntBASIC4.47□□□□□ -1.69
CLSTN1O94985 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.47□□□□□ -1.69
CLSTN1O94985 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.47□□□□□ -1.69
CLSTN1O94985 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.47□□□□□ -1.69
CLSTN1O94985 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.47□□□□□ -1.69
CLSTN1O94985 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.47□□□□□ -1.69
CLSTN1O94985 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.47□□□□□ -1.69
CLSTN1O94985 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.47□□□□□ -1.69
CLSTN1O94985 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.47□□□□□ -1.69
CLSTN1O94985 HSPE1P7-201ENST00000604681 321 ntBASIC4.47□□□□□ -1.69
CLSTN1O94985 AC008945.2-201ENST00000606056 604 ntBASIC4.47□□□□□ -1.69
CLSTN1O94985 MIR486-1-201ENST00000612171 68 ntBASIC4.47□□□□□ -1.69
CLSTN1O94985 AL445567.2-201ENST00000618935 498 ntBASIC4.47□□□□□ -1.69
CLSTN1O94985 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.47□□□□□ -1.69
CLSTN1O94985 AL512643.1-201ENST00000635735 524 ntBASIC4.47□□□□□ -1.69
CLSTN1O94985 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLSTN1O94985 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLSTN1O94985 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLSTN1O94985 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLSTN1O94985 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLSTN1O94985 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLSTN1O94985 RNU6-140P-201ENST00000384566 108 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 Y_RNA.534-201ENST00000384599 112 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 OR6C66P-201ENST00000414917 930 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.46□□□□□ -1.7
CLSTN1O94985 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.46□□□□□ -1.7
CLSTN1O94985 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.46□□□□□ -1.7
CLSTN1O94985 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.46□□□□□ -1.7
CLSTN1O94985 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.46□□□□□ -1.7
CLSTN1O94985 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.46□□□□□ -1.7
CLSTN1O94985 RNU6-261P-201ENST00000459506 102 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC098591.2-201ENST00000510152 315 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 RNU6-143P-201ENST00000516942 93 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 RNU6-685P-201ENST00000517088 95 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.46□□□□□ -1.7
CLSTN1O94985 AC109635.3-201ENST00000529536 185 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 DNAJC8P1-201ENST00000554535 372 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.46□□□□□ -1.7
CLSTN1O94985 AC025627.2-201ENST00000576220 160 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.46□□□□□ -1.7
CLSTN1O94985 BNIP3P30-201ENST00000601184 574 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AL162413.1-201ENST00000603198 110 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC004805.2-201ENST00000605382 482 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC107294.1-201ENST00000609524 467 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC128687.2-201ENST00000609657 566 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AP001486.3-201ENST00000615334 372 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AL138880.2-201ENST00000616214 239 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 MIR8059-201ENST00000620427 81 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 YWHAEP7-203ENST00000622054 312 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 AC007496.3-201ENST00000624987 3443 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLSTN1O94985 ZNF962P-201ENST00000443465 3140 ntBASIC4.46□□□□□ -1.7
CLSTN1O94985 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLSTN1O94985 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLSTN1O94985 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
CLSTN1O94985 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLSTN1O94985 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLSTN1O94985 FTLP6-201ENST00000355274 422 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 SNORA70C-201ENST00000384538 135 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 RNU6-628P-201ENST00000410675 107 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 RAB28P1-201ENST00000411517 641 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 USP9YP6-201ENST00000413550 854 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.45□□□□□ -1.7
CLSTN1O94985 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.45□□□□□ -1.7
CLSTN1O94985 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.45□□□□□ -1.7
CLSTN1O94985 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.45□□□□□ -1.7
CLSTN1O94985 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.45□□□□□ -1.7
CLSTN1O94985 RPL12P25-201ENST00000455592 494 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 AC069499.1-201ENST00000489433 509 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.45□□□□□ -1.7
CLSTN1O94985 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLSTN1O94985 AC099522.1-202ENST00000514718 367 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.45□□□□□ -1.7
CLSTN1O94985 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.45□□□□□ -1.7
CLSTN1O94985 MIR4697-201ENST00000582977 78 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.45□□□□□ -1.7
CLSTN1O94985 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.45□□□□□ -1.7
CLSTN1O94985 AC083809.1-201ENST00000615051 472 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.45□□□□□ -1.7
CLSTN1O94985 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLSTN1O94985 TPTE2P4-201ENST00000258589 1605 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 AL354685.2-201ENST00000448218 1447 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 ZNF285B-201ENST00000561698 1767 ntBASIC4.45□□□□□ -1.7
CLSTN1O94985 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.44□□□□□ -1.7
CLSTN1O94985 MAPK10-322ENST00000641485 4530 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLSTN1O94985 RNU6-552P-201ENST00000362869 119 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 Y_RNA.248-201ENST00000364501 109 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.44□□□□□ -1.7
CLSTN1O94985 CD24P4-201ENST00000382840 243 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLSTN1O94985 AL022722.2-201ENST00000402519 180 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 RNU6-908P-201ENST00000410160 94 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 RNU6-1068P-201ENST00000410958 103 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 RNU6-387P-201ENST00000411331 105 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 HSPE1P12-201ENST00000412576 301 ntBASIC4.44□□□□□ -1.7
CLSTN1O94985 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.44□□□□□ -1.7
CLSTN1O94985 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.44□□□□□ -1.7
CLSTN1O94985 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms