Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB3O75112 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB3O75112 SNRPGP6-201ENST00000451124 220 ntBASIC3.31□□□□□ -1.88
LDB3O75112 HMGN2P7-201ENST00000456186 273 ntBASIC3.31□□□□□ -1.88
LDB3O75112 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB3O75112 RPS4XP13-201ENST00000483219 789 ntBASIC3.31□□□□□ -1.88
LDB3O75112 MTCO3P9-201ENST00000506989 781 ntBASIC3.31□□□□□ -1.88
LDB3O75112 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB3O75112 AC010486.1-201ENST00000511793 424 ntBASIC3.31□□□□□ -1.88
LDB3O75112 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB3O75112 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
LDB3O75112 SNORA40.12-201ENST00000516329 111 ntBASIC3.31□□□□□ -1.88
LDB3O75112 RNA5SP337-201ENST00000517007 109 ntBASIC3.31□□□□□ -1.88
LDB3O75112 RN7SKP289-201ENST00000517244 295 ntBASIC3.31□□□□□ -1.88
LDB3O75112 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.31□□□□□ -1.88
LDB3O75112 AC055876.1-202ENST00000567053 138 ntBASIC3.31□□□□□ -1.88
LDB3O75112 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
LDB3O75112 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB3O75112 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB3O75112 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB3O75112 AL050343.2-201ENST00000607338 280 ntBASIC3.31□□□□□ -1.88
LDB3O75112 AL132765.2-201ENST00000610812 351 ntBASIC3.31□□□□□ -1.88
LDB3O75112 AC093838.1-201ENST00000613014 469 ntBASIC3.31□□□□□ -1.88
LDB3O75112 AC009161.2-201ENST00000624626 138 ntBASIC3.31□□□□□ -1.88
LDB3O75112 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB3O75112 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB3O75112 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB3O75112 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB3O75112 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB3O75112 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LDB3O75112 CKAP2P1-201ENST00000555477 2049 ntBASIC3.31□□□□□ -1.88
LDB3O75112 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LDB3O75112 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB3O75112 MIR423-201ENST00000362201 94 ntBASIC3.3□□□□□ -1.88
LDB3O75112 RNU4-79P-201ENST00000362764 141 ntBASIC3.3□□□□□ -1.88
LDB3O75112 RNU6-223P-201ENST00000362830 107 ntBASIC3.3□□□□□ -1.88
LDB3O75112 RNY3P13-201ENST00000365542 102 ntBASIC3.3□□□□□ -1.88
LDB3O75112 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDB3O75112 Y_RNA.419-201ENST00000384041 102 ntBASIC3.3□□□□□ -1.88
LDB3O75112 MIR218-2-201ENST00000385006 110 ntBASIC3.3□□□□□ -1.88
LDB3O75112 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDB3O75112 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
LDB3O75112 RN7SKP27-201ENST00000410684 333 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
LDB3O75112 CYP4F29P-201ENST00000420685 446 ntBASIC3.3□□□□□ -1.88
LDB3O75112 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
LDB3O75112 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB3O75112 RPL36AP53-201ENST00000432891 316 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB3O75112 SEPT14P3-201ENST00000439401 183 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB3O75112 AL732372.2-207ENST00000445840 183 ntBASIC3.3□□□□□ -1.88
LDB3O75112 SEPT14P2-201ENST00000453405 183 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC007967.1-201ENST00000455422 1159 ntBASIC3.3□□□□□ -1.88
LDB3O75112 RNU6-261P-201ENST00000459506 102 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC025518.1-201ENST00000479856 347 ntBASIC3.3□□□□□ -1.88
LDB3O75112 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LDB3O75112 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB3O75112 AC135721.1-201ENST00000497954 479 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB3O75112 PCBP2P3-201ENST00000509726 843 ntBASIC3.3□□□□□ -1.88
LDB3O75112 SEPT14P4-201ENST00000513445 186 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB3O75112 FO082796.1-201ENST00000523795 183 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC103843.2-201ENST00000530523 682 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB3O75112 OR5B10P-201ENST00000532869 642 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB3O75112 AC125611.2-201ENST00000551907 647 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AL133153.1-201ENST00000557756 303 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB3O75112 AC018638.8-201ENST00000588755 281 ntBASIC3.3□□□□□ -1.88
LDB3O75112 NRBF2P5-201ENST00000603087 788 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC005034.5-201ENST00000604219 466 ntBASIC3.3□□□□□ -1.88
LDB3O75112 SNORA51-201ENST00000606420 132 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AL603758.1-201ENST00000618654 241 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC243312.2-201ENST00000623340 601 ntBASIC3.3□□□□□ -1.88
LDB3O75112 AC100810.6-201ENST00000638068 285 ntBASIC3.3□□□□□ -1.88
LDB3O75112 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB3O75112 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDB3O75112 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
LDB3O75112 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDB3O75112 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LDB3O75112 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LDB3O75112 RNU6-767P-201ENST00000384132 107 ntBASIC3.29□□□□□ -1.88
LDB3O75112 RNU6-74P-201ENST00000384235 107 ntBASIC3.29□□□□□ -1.88
LDB3O75112 RNU6-39P-201ENST00000384344 107 ntBASIC3.29□□□□□ -1.88
LDB3O75112 Y_RNA.481-201ENST00000384373 102 ntBASIC3.29□□□□□ -1.88
LDB3O75112 RNU6-606P-201ENST00000384721 111 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AL356057.2-201ENST00000403318 432 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB3O75112 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB3O75112 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDB3O75112 ELOCP4-201ENST00000420090 333 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB3O75112 AC079780.1-201ENST00000428259 207 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB3O75112 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms