Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 OR4K6P-201ENST00000416478 897 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 HMGB1P35-201ENST00000503360 598 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 AC008834.1-201ENST00000511612 175 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
PFDN1O60925 SNORA4.4-201ENST00000515921 135 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 AC084851.1-201ENST00000529105 249 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 MIR4444-1-201ENST00000581696 74 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 MIR4444-2-201ENST00000584390 74 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 AC005261.5-201ENST00000596280 355 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.41□□□□□ -2.18
PFDN1O60925 AL391813.1-201ENST00000603098 260 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 AC008443.7-201ENST00000622195 246 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 AP003400.5-201ENST00000624827 617 ntBASIC1.41□□□□□ -2.18
PFDN1O60925 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.4□□□□□ -2.19
PFDN1O60925 MTND5P6-201ENST00000422338 1798 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 RNU6-251P-201ENST00000363235 104 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 RNU6-619P-201ENST00000365146 108 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 RNU6-878P-201ENST00000384578 110 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AL079342.1-201ENST00000401460 267 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AC244453.4-201ENST00000419150 388 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AC246680.2-201ENST00000422106 389 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 BPY2DP-201ENST00000422208 265 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.4□□□□□ -2.19
PFDN1O60925 AC244035.1-201ENST00000430042 390 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 FABP5P14-201ENST00000437273 393 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AL353691.1-201ENST00000451332 387 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.4□□□□□ -2.19
PFDN1O60925 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.4□□□□□ -2.19
PFDN1O60925 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.4□□□□□ -2.19
PFDN1O60925 AC007182.2-201ENST00000489251 402 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 MTCYBP35-201ENST00000503630 1137 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.4□□□□□ -2.19
PFDN1O60925 AL359212.1-201ENST00000556608 614 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 NIFKP8-201ENST00000560500 874 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AC095057.3-201ENST00000567102 1157 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AC005951.2-201ENST00000576282 495 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 MIR4429-201ENST00000580105 73 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AC024619.4-201ENST00000580924 316 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 MIR4765-201ENST00000585007 77 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.4□□□□□ -2.19
PFDN1O60925 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.4□□□□□ -2.19
PFDN1O60925 SEPT7P9-203ENST00000604116 343 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AL121652.1-201ENST00000608851 448 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 AP003485.2-201ENST00000623636 610 ntBASIC1.4□□□□□ -2.19
PFDN1O60925 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
PFDN1O60925 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PFDN1O60925 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.39□□□□□ -2.19
PFDN1O60925 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.39□□□□□ -2.19
PFDN1O60925 SNORA8-201ENST00000384574 139 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 SNORA48.7-201ENST00000391302 135 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AL356131.1-201ENST00000405826 414 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC009963.1-201ENST00000417265 157 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.39□□□□□ -2.19
PFDN1O60925 AC007098.1-201ENST00000420122 367 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC007742.1-201ENST00000425789 329 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AL645568.3-201ENST00000433683 316 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 ELOCP26-201ENST00000436067 329 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC092170.1-201ENST00000440211 356 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.39□□□□□ -2.19
PFDN1O60925 RPL23AP23-201ENST00000452590 471 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.39□□□□□ -2.19
PFDN1O60925 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.39□□□□□ -2.19
PFDN1O60925 RPS27AP10-201ENST00000496103 208 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
PFDN1O60925 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
PFDN1O60925 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.39□□□□□ -2.19
PFDN1O60925 ARL2BPP5-201ENST00000523141 481 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 GNAI2P1-201ENST00000541815 315 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.39□□□□□ -2.19
PFDN1O60925 AC007151.1-201ENST00000572774 483 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 MIR1254-2-201ENST00000579553 63 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.39□□□□□ -2.19
PFDN1O60925 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.39□□□□□ -2.19
PFDN1O60925 DNAJC19P3-201ENST00000594491 331 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.39□□□□□ -2.19
PFDN1O60925 DUXAP11-201ENST00000603858 526 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC136601.2-201ENST00000604356 474 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AL163051.2-201ENST00000618976 735 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC006020.1-201ENST00000420179 1854 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 AC005832.2-201ENST00000538921 1430 ntBASIC1.39□□□□□ -2.19
PFDN1O60925 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.38□□□□□ -2.19
PFDN1O60925 RNU1-72P-201ENST00000362976 153 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 SNORD116-23-201ENST00000384645 92 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 MIR128-1-201ENST00000384921 82 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 AL031679.1-201ENST00000400616 525 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 MIR888-201ENST00000401186 77 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 AL356057.1-202ENST00000402263 756 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 AL139098.1-201ENST00000407291 389 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 AL136133.1-201ENST00000413694 376 ntBASIC1.38□□□□□ -2.19
PFDN1O60925 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
PFDN1O60925 PPP1R11P2-201ENST00000423543 382 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms