Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNX3O60493 FARSBP1-201ENST00000435808 1778 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AL161431.1-201ENST00000618966 4205 ntBASIC2.92□□□□□ -1.94
SNX3O60493 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNX3O60493 Y_RNA.359-201ENST00000365498 102 ntBASIC2.92□□□□□ -1.94
SNX3O60493 RNU6-39P-201ENST00000384344 107 ntBASIC2.92□□□□□ -1.94
SNX3O60493 RNU6-14P-201ENST00000384630 106 ntBASIC2.92□□□□□ -1.94
SNX3O60493 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
SNX3O60493 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SNX3O60493 MRPL50P2-201ENST00000416821 482 ntBASIC2.92□□□□□ -1.94
SNX3O60493 ZNF90P2-204ENST00000419323 1075 ntBASIC2.92□□□□□ -1.94
SNX3O60493 RAC1P6-201ENST00000423911 575 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AC137499.1-201ENST00000427602 88 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.92□□□□□ -1.94
SNX3O60493 RPL21P23-201ENST00000446654 460 ntBASIC2.92□□□□□ -1.94
SNX3O60493 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 RPS26P21-201ENST00000475397 348 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AC079140.3-201ENST00000511111 550 ntBASIC2.92□□□□□ -1.94
SNX3O60493 SNORA31.3-201ENST00000516029 96 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.92□□□□□ -1.94
SNX3O60493 AP000867.2-201ENST00000532468 320 ntBASIC2.92□□□□□ -1.94
SNX3O60493 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AMZ2P1-203ENST00000565833 850 ntBASIC2.92□□□□□ -1.94
SNX3O60493 MIR4528-201ENST00000577763 90 ntBASIC2.92□□□□□ -1.94
SNX3O60493 MIR3167-201ENST00000579623 85 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AC098614.4-201ENST00000607601 462 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AC245008.1-201ENST00000608123 476 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AC006566.1-201ENST00000608943 513 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX3O60493 AL138880.2-201ENST00000616214 239 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AL589994.2-201ENST00000621124 579 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AP003399.1-201ENST00000637534 361 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AL392088.2-201ENST00000637607 285 ntBASIC2.92□□□□□ -1.94
SNX3O60493 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.92□□□□□ -1.94
SNX3O60493 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
SNX3O60493 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX3O60493 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX3O60493 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX3O60493 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX3O60493 RNU6-188P-201ENST00000364207 107 ntBASIC2.91□□□□□ -1.94
SNX3O60493 SMIM11P1-201ENST00000369586 178 ntBASIC2.91□□□□□ -1.94
SNX3O60493 SNORA20.2-201ENST00000383922 131 ntBASIC2.91□□□□□ -1.94
SNX3O60493 SNORD15B-201ENST00000384714 146 ntBASIC2.91□□□□□ -1.94
SNX3O60493 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.91□□□□□ -1.94
SNX3O60493 BTF3L4P1-201ENST00000413813 468 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.91□□□□□ -1.94
SNX3O60493 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.91□□□□□ -1.94
SNX3O60493 AL353706.1-201ENST00000436728 494 ntBASIC2.91□□□□□ -1.94
SNX3O60493 HMGB3P12-201ENST00000438745 556 ntBASIC2.91□□□□□ -1.94
SNX3O60493 NEFMP1-201ENST00000443423 1006 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC010099.1-201ENST00000455434 375 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC087588.1-201ENST00000462203 316 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC034236.1-201ENST00000469891 373 ntBASIC2.91□□□□□ -1.94
SNX3O60493 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
SNX3O60493 AC103987.1-201ENST00000473394 348 ntBASIC2.91□□□□□ -1.94
SNX3O60493 RN7SL432P-201ENST00000484057 298 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC106707.2-201ENST00000484182 374 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX3O60493 Vault.3-201ENST00000516676 95 ntBASIC2.91□□□□□ -1.94
SNX3O60493 RNU6-826P-201ENST00000516827 104 ntBASIC2.91□□□□□ -1.94
SNX3O60493 RNU6-1092P-201ENST00000516955 87 ntBASIC2.91□□□□□ -1.94
SNX3O60493 RNA5SP471-201ENST00000516971 106 ntBASIC2.91□□□□□ -1.94
SNX3O60493 RNA5SP291-201ENST00000517222 105 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX3O60493 HMGB1P41-201ENST00000520234 440 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX3O60493 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX3O60493 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX3O60493 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SNX3O60493 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX3O60493 RPS3AP4-201ENST00000555161 764 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX3O60493 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX3O60493 AC005951.1-201ENST00000576706 485 ntBASIC2.91□□□□□ -1.94
SNX3O60493 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX3O60493 AL670379.6-201ENST00000603753 252 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AL670379.11-201ENST00000604059 253 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC008162.1-201ENST00000604718 254 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC007363.1-201ENST00000604736 620 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AL670379.1-201ENST00000604752 252 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AL670379.5-201ENST00000605253 252 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AL670379.12-201ENST00000605291 253 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AL670379.8-201ENST00000605353 252 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AL670379.7-201ENST00000605823 252 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AC138932.5-201ENST00000617759 563 ntBASIC2.91□□□□□ -1.94
SNX3O60493 FRG1KP-201ENST00000623592 341 ntBASIC2.91□□□□□ -1.94
SNX3O60493 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.91□□□□□ -1.94
SNX3O60493 AP003122.5-201ENST00000527668 3766 ntBASIC2.91□□□□□ -1.94
SNX3O60493 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SNX3O60493 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SNX3O60493 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.9□□□□□ -1.94
SNX3O60493 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms