Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 YWHAEP4-201ENST00000505390 198 ntBASIC5.81□□□□□ -1.48
ACTN4O43707 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.81□□□□□ -1.48
ACTN4O43707 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.81□□□□□ -1.48
ACTN4O43707 AC023575.1-201ENST00000580510 358 ntBASIC5.81□□□□□ -1.48
ACTN4O43707 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.81□□□□□ -1.48
ACTN4O43707 AC008749.1-201ENST00000597650 306 ntBASIC5.81□□□□□ -1.48
ACTN4O43707 AC008121.1-201ENST00000603244 268 ntBASIC5.81□□□□□ -1.48
ACTN4O43707 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.81□□□□□ -1.48
ACTN4O43707 AL161629.2-201ENST00000615347 275 ntBASIC5.81□□□□□ -1.48
ACTN4O43707 AC099506.2-201ENST00000623074 221 ntBASIC5.81□□□□□ -1.48
ACTN4O43707 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
ACTN4O43707 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ACTN4O43707 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ACTN4O43707 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ACTN4O43707 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ACTN4O43707 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.81□□□□□ -1.48
ACTN4O43707 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ACTN4O43707 AC097461.1-201ENST00000568928 2821 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.8□□□□□ -1.48
ACTN4O43707 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ACTN4O43707 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ACTN4O43707 U3.2-201ENST00000362981 210 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 RNU4-9P-201ENST00000364951 139 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
ACTN4O43707 SNORA17A-201ENST00000391185 133 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ACTN4O43707 AC009804.1-201ENST00000400949 179 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 AL357139.1-201ENST00000407792 426 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 RNA5SP56-201ENST00000410277 118 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 DPPA2P3-201ENST00000411853 655 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 RPS15AP7-201ENST00000439294 405 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 HMGB3P16-201ENST00000508037 287 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 RNA5SP362-201ENST00000516048 118 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 RNA5SP272-201ENST00000516095 111 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.8□□□□□ -1.48
ACTN4O43707 AC006349.1-201ENST00000555526 235 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 HMGB1P14-201ENST00000557424 591 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.8□□□□□ -1.48
ACTN4O43707 AC233702.2-202ENST00000562547 291 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 AC060766.3-201ENST00000591442 263 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.8□□□□□ -1.48
ACTN4O43707 AC069307.1-201ENST00000602820 447 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 AC005828.6-201ENST00000606610 232 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.8□□□□□ -1.48
ACTN4O43707 SNORA17.5-201ENST00000630429 132 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
ACTN4O43707 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.8□□□□□ -1.48
ACTN4O43707 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
ACTN4O43707 OR4G2P-202ENST00000641004 1759 ntBASIC5.8□□□□□ -1.48
ACTN4O43707 MUC2-202ENST00000613187 4845 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.79□□□□□ -1.48
ACTN4O43707 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ACTN4O43707 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.79□□□□□ -1.48
ACTN4O43707 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ACTN4O43707 RAD17P1-201ENST00000418130 2042 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ACTN4O43707 MIR412-201ENST00000362142 91 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 Y_RNA.127-201ENST00000363386 109 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RNA5SP242-201ENST00000364171 118 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RNU6-512P-201ENST00000364438 103 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RNA5SP132-201ENST00000364725 118 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 Y_RNA.357-201ENST00000365487 109 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RPS4XP3-201ENST00000398541 413 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 AL035079.1-201ENST00000405210 287 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RNU6-1025P-201ENST00000410629 104 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.79□□□□□ -1.48
ACTN4O43707 AL592148.1-201ENST00000413568 445 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RPS11P7-201ENST00000442125 465 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 AC018638.3-201ENST00000461273 132 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.79□□□□□ -1.48
ACTN4O43707 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.79□□□□□ -1.48
ACTN4O43707 RNU6-1333P-201ENST00000516162 93 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RNU6-927P-201ENST00000516199 100 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 MIR3684-201ENST00000579779 74 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 MIR4423-201ENST00000580922 80 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 AL139395.1-201ENST00000603662 160 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.79□□□□□ -1.48
ACTN4O43707 AC109309.2-201ENST00000612597 332 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RPSAP73-201ENST00000614820 330 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ACTN4O43707 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ACTN4O43707 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.79□□□□□ -1.48
ACTN4O43707 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ACTN4O43707 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.79□□□□□ -1.48
ACTN4O43707 Z95331.1-201ENST00000623075 23112 ntBASIC5.79□□□□□ -1.48
ACTN4O43707 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ACTN4O43707 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ACTN4O43707 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
ACTN4O43707 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ACTN4O43707 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.78□□□□□ -1.48
ACTN4O43707 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ACTN4O43707 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ACTN4O43707 Y_RNA.446-201ENST00000384178 104 ntBASIC5.78□□□□□ -1.48
ACTN4O43707 RNU6-318P-201ENST00000384283 103 ntBASIC5.78□□□□□ -1.48
ACTN4O43707 Y_RNA.571-201ENST00000384753 98 ntBASIC5.78□□□□□ -1.48
ACTN4O43707 LAP3P1-201ENST00000403648 294 ntBASIC5.78□□□□□ -1.48
ACTN4O43707 MIR1182-201ENST00000408363 97 ntBASIC5.78□□□□□ -1.48
ACTN4O43707 SNORD12B-201ENST00000410433 91 ntBASIC5.78□□□□□ -1.48
ACTN4O43707 RPL23AP26-201ENST00000412728 464 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms