Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL392048.1-201ENST00000613946 534 ntBASIC2.6□□□□□ -1.99
RIPK2O43353 AC012314.7-201ENST00000619693 93 ntBASIC2.6□□□□□ -1.99
RIPK2O43353 MIR6075-201ENST00000620782 95 ntBASIC2.6□□□□□ -1.99
RIPK2O43353 AP002791.1-201ENST00000623291 381 ntBASIC2.6□□□□□ -1.99
RIPK2O43353 AC116618.1-201ENST00000634617 774 ntBASIC2.6□□□□□ -1.99
RIPK2O43353 MIR7157-201ENST00000635801 60 ntBASIC2.6□□□□□ -1.99
RIPK2O43353 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RIPK2O43353 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RIPK2O43353 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
RIPK2O43353 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RIPK2O43353 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RIPK2O43353 AC010889.1-201ENST00000566193 2666 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 RNU6-744P-201ENST00000365557 107 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 RNU6-1316P-201ENST00000384242 108 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RIPK2O43353 RPS4XP7-201ENST00000406274 780 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 RNU6-920P-201ENST00000410926 92 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 UBE2FP1-201ENST00000416536 447 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 RPL35AP12-201ENST00000425362 338 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 AL451062.2-201ENST00000427515 271 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 USP12PX-201ENST00000432383 1057 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.59□□□□□ -1.99
RIPK2O43353 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.59□□□□□ -1.99
RIPK2O43353 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RIPK2O43353 MTCO3P45-201ENST00000443036 613 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.59□□□□□ -1.99
RIPK2O43353 AC011753.1-201ENST00000451001 220 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.59□□□□□ -1.99
RIPK2O43353 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.59□□□□□ -1.99
RIPK2O43353 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RIPK2O43353 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.59□□□□□ -1.99
RIPK2O43353 AC023141.11-201ENST00000508864 202 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.59□□□□□ -1.99
RIPK2O43353 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.59□□□□□ -1.99
RIPK2O43353 MTATP6P24-201ENST00000576835 677 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 MIR3944-201ENST00000581277 108 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.59□□□□□ -1.99
RIPK2O43353 VN1R92P-201ENST00000598511 928 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 AC109809.1-201ENST00000619665 545 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -1.99
RIPK2O43353 AC099063.3-201ENST00000642066 185 ntBASIC2.59□□□□□ -1.99
RIPK2O43353 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.59□□□□□ -2
RIPK2O43353 AP000776.1-201ENST00000530032 1663 ntBASIC2.59□□□□□ -2
RIPK2O43353 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.58□□□□□ -2
RIPK2O43353 MTND5P29-201ENST00000458676 1807 ntBASIC2.58□□□□□ -2
RIPK2O43353 ZNF833P-201ENST00000424938 1494 ntBASIC2.58□□□□□ -2
RIPK2O43353 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
RIPK2O43353 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RIPK2O43353 AC007336.1-201ENST00000576365 3828 ntBASIC2.58□□□□□ -2
RIPK2O43353 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.58□□□□□ -2
RIPK2O43353 RNU4-28P-201ENST00000364739 141 ntBASIC2.58□□□□□ -2
RIPK2O43353 MIR1284-201ENST00000408337 120 ntBASIC2.58□□□□□ -2
RIPK2O43353 RNU6-1328P-201ENST00000410938 106 ntBASIC2.58□□□□□ -2
RIPK2O43353 AL008987.1-201ENST00000415528 237 ntBASIC2.58□□□□□ -2
RIPK2O43353 XKRYP1-201ENST00000423438 492 ntBASIC2.58□□□□□ -2
RIPK2O43353 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.58□□□□□ -2
RIPK2O43353 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.58□□□□□ -2
RIPK2O43353 XKRYP2-201ENST00000432915 492 ntBASIC2.58□□□□□ -2
RIPK2O43353 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.58□□□□□ -2
RIPK2O43353 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.58□□□□□ -2
RIPK2O43353 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.58□□□□□ -2
RIPK2O43353 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.58□□□□□ -2
RIPK2O43353 AL139109.1-201ENST00000455491 297 ntBASIC2.58□□□□□ -2
RIPK2O43353 MEMO1P3-201ENST00000459811 302 ntBASIC2.58□□□□□ -2
RIPK2O43353 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.58□□□□□ -2
RIPK2O43353 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.58□□□□□ -2
RIPK2O43353 AC026427.2-201ENST00000506228 536 ntBASIC2.58□□□□□ -2
RIPK2O43353 AC104090.1-201ENST00000506341 1171 ntBASIC2.58□□□□□ -2
RIPK2O43353 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.58□□□□□ -2
RIPK2O43353 AC112673.1-201ENST00000513168 575 ntBASIC2.58□□□□□ -2
RIPK2O43353 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.58□□□□□ -2
RIPK2O43353 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.58□□□□□ -2
RIPK2O43353 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.58□□□□□ -2
RIPK2O43353 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
RIPK2O43353 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.58□□□□□ -2
RIPK2O43353 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.58□□□□□ -2
RIPK2O43353 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
RIPK2O43353 AL158211.1-201ENST00000566763 763 ntBASIC2.58□□□□□ -2
RIPK2O43353 AC061975.8-201ENST00000587058 721 ntBASIC2.58□□□□□ -2
RIPK2O43353 BNIP3P22-201ENST00000593399 556 ntBASIC2.58□□□□□ -2
RIPK2O43353 AL589743.7-201ENST00000612637 233 ntBASIC2.58□□□□□ -2
RIPK2O43353 AC084757.4-201ENST00000616350 526 ntBASIC2.58□□□□□ -2
RIPK2O43353 AC006927.4-201ENST00000639187 543 ntBASIC2.58□□□□□ -2
RIPK2O43353 OR8B1P-202ENST00000641132 1178 ntBASIC2.58□□□□□ -2
RIPK2O43353 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RIPK2O43353 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
RIPK2O43353 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
RIPK2O43353 Y_RNA.245-201ENST00000364493 95 ntBASIC2.57□□□□□ -2
RIPK2O43353 Y_RNA.311-201ENST00000365068 96 ntBASIC2.57□□□□□ -2
RIPK2O43353 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
RIPK2O43353 RNU6-220P-201ENST00000390919 107 ntBASIC2.57□□□□□ -2
RIPK2O43353 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.57□□□□□ -2
RIPK2O43353 HIGD1AP15-201ENST00000416198 280 ntBASIC2.57□□□□□ -2
RIPK2O43353 RPS24P7-201ENST00000416921 246 ntBASIC2.57□□□□□ -2
RIPK2O43353 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
RIPK2O43353 ELOCP14-201ENST00000428070 331 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
RIPK2O43353 ELOCP7-201ENST00000439968 331 ntBASIC2.57□□□□□ -2
RIPK2O43353 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.57□□□□□ -2
RIPK2O43353 PAXBP1P1-201ENST00000449315 447 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms