Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPL36AP53-201ENST00000432891 316 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AC092573.2-201ENST00000434546 243 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 HSPD1P21-201ENST00000436541 245 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.82□□□□□ -1.8
PHGDHO43175 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.82□□□□□ -1.8
PHGDHO43175 RNU7-180P-201ENST00000459240 63 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AP001086.1-201ENST00000494882 321 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 MTCYBP18-201ENST00000501056 747 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 RNU1-61P-201ENST00000516107 151 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 RNU6-143P-201ENST00000516942 93 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 RNA5SP290-201ENST00000517133 127 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 MTND4P7-201ENST00000523876 130 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AL137161.1-201ENST00000532231 390 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.82□□□□□ -1.8
PHGDHO43175 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.82□□□□□ -1.8
PHGDHO43175 SYF2P1-201ENST00000550658 413 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AC025884.1-201ENST00000556034 378 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.82□□□□□ -1.8
PHGDHO43175 RNU4-89P-201ENST00000607443 133 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AL390240.1-201ENST00000612950 384 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 MIR6716-201ENST00000613413 80 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 uc_338.34-201ENST00000617467 174 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AL357559.1-201ENST00000622228 274 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.82□□□□□ -1.8
PHGDHO43175 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.82□□□□□ -1.8
PHGDHO43175 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.82□□□□□ -1.8
PHGDHO43175 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PHGDHO43175 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
PHGDHO43175 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.82□□□□□ -1.8
PHGDHO43175 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
PHGDHO43175 AC007785.2-201ENST00000598627 1916 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PHGDHO43175 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PHGDHO43175 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PHGDHO43175 RPL32P3-201ENST00000359025 275 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 RNU4-20P-201ENST00000365601 151 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 MIR3074-201ENST00000384885 81 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PHGDHO43175 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.81□□□□□ -1.8
PHGDHO43175 AL160275.3-201ENST00000423876 471 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 UBE2D3P2-201ENST00000424409 445 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 MTND3P10-201ENST00000450967 341 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 RN7SL385P-201ENST00000468873 276 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 AC010618.1-201ENST00000469924 477 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 RPL23AP11-201ENST00000475260 469 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 AC084198.1-201ENST00000477747 402 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 RPL21P99-201ENST00000480369 423 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.81□□□□□ -1.8
PHGDHO43175 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.81□□□□□ -1.8
PHGDHO43175 AC018710.1-201ENST00000506509 158 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.81□□□□□ -1.8
PHGDHO43175 AL121579.1-201ENST00000555129 305 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.81□□□□□ -1.8
PHGDHO43175 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.81□□□□□ -1.8
PHGDHO43175 AC023043.4-201ENST00000612081 449 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.81□□□□□ -1.8
PHGDHO43175 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.81□□□□□ -1.8
PHGDHO43175 AL512643.1-201ENST00000635735 524 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 Z99571.1-201ENST00000636677 394 ntBASIC3.81□□□□□ -1.8
PHGDHO43175 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PHGDHO43175 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PHGDHO43175 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHGDHO43175 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHGDHO43175 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHGDHO43175 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.8□□□□□ -1.8
PHGDHO43175 Y_RNA.160-201ENST00000363677 92 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 Y_RNA.231-201ENST00000364358 102 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 MIR325-201ENST00000385260 98 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 MIR199A2-201ENST00000385289 110 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHGDHO43175 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.8□□□□□ -1.8
PHGDHO43175 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.8□□□□□ -1.8
PHGDHO43175 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PHGDHO43175 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.8□□□□□ -1.8
PHGDHO43175 AL121601.2-201ENST00000438019 707 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.8□□□□□ -1.8
PHGDHO43175 AL671855.1-201ENST00000446875 1203 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.8□□□□□ -1.8
PHGDHO43175 RPL21P11-201ENST00000461458 483 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 RPS15AP34-201ENST00000487776 387 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 AC026979.1-201ENST00000492525 396 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 RPL30P5-201ENST00000494923 336 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 RN7SKP122-201ENST00000515923 296 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
PHGDHO43175 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.8□□□□□ -1.8
PHGDHO43175 PARP1P2-201ENST00000556806 195 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 TRAV28-201ENST00000557548 323 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PHGDHO43175 MIR5583-1-201ENST00000580941 59 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.8□□□□□ -1.8
PHGDHO43175 BNIP3P10-201ENST00000605360 577 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 AL591034.3-201ENST00000605511 685 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 AC006504.8-201ENST00000621046 635 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 MIR6830-201ENST00000636015 70 ntBASIC3.8□□□□□ -1.8
PHGDHO43175 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms