Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN3O15551 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN3O15551 VN1R82P-201ENST00000601481 356 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 AC007621.1-201ENST00000604544 437 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN3O15551 AP000676.3-201ENST00000623299 569 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.72□□□□□ -1.97
CLDN3O15551 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN3O15551 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.71□□□□□ -1.97
CLDN3O15551 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN3O15551 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CLDN3O15551 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN3O15551 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN3O15551 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CLDN3O15551 MIR518C-201ENST00000384822 101 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RN7SKP266-201ENST00000410232 287 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RNU2-49P-201ENST00000410666 184 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN3O15551 RPL21P24-201ENST00000413752 448 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 TXNL1P1-201ENST00000429528 554 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AC092427.1-202ENST00000430569 476 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RPS15AP5-201ENST00000436276 388 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RPS15AP7-201ENST00000439294 405 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AL009048.1-201ENST00000450437 298 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RPL23AP35-201ENST00000451906 501 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AC133134.1-201ENST00000466800 359 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RPL23AP45-201ENST00000476406 468 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN3O15551 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN3O15551 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CLDN3O15551 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.71□□□□□ -1.98
CLDN3O15551 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CLDN3O15551 MTND5P13-201ENST00000513046 1079 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RNU6-826P-201ENST00000516827 104 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN3O15551 COX6CP5-201ENST00000527162 228 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AP001646.1-201ENST00000527936 915 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.71□□□□□ -1.98
CLDN3O15551 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN3O15551 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN3O15551 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN3O15551 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN3O15551 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CLDN3O15551 MTCO2P2-201ENST00000591258 225 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 RPP40P2-201ENST00000603596 712 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AC004908.2-201ENST00000609090 574 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN3O15551 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CLDN3O15551 AC140725.3-201ENST00000616193 880 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AC013470.4-201ENST00000619978 986 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 AP000484.1-201ENST00000620067 1252 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CLDN3O15551 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN3O15551 PABPC1P9-201ENST00000426076 1612 ntBASIC2.71□□□□□ -1.98
CLDN3O15551 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CLDN3O15551 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN3O15551 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN3O15551 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN3O15551 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CLDN3O15551 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN3O15551 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN3O15551 MIR888-201ENST00000401186 77 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 USP12PX-201ENST00000432383 1057 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 Z80107.1-201ENST00000436830 412 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 RSU1P2-202ENST00000437884 485 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN3O15551 ELOCP30-201ENST00000447108 299 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AC010631.1-201ENST00000474150 156 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AC106872.3-201ENST00000495104 446 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AC104090.1-201ENST00000506341 1171 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN3O15551 AC119751.4-201ENST00000507498 357 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 LTV1P1-201ENST00000510683 1237 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CLDN3O15551 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.7□□□□□ -1.98
CLDN3O15551 AL133153.1-201ENST00000557756 303 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN3O15551 AC027176.1-201ENST00000560204 514 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN3O15551 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AL391001.1-201ENST00000602747 715 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AL356575.1-201ENST00000603008 283 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN3O15551 AL356596.1-201ENST00000624230 379 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 CTSLP2-204ENST00000629029 392 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.7□□□□□ -1.98
CLDN3O15551 MIR7515-201ENST00000637837 67 ntBASIC2.7□□□□□ -1.98
CLDN3O15551 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN3O15551 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.69□□□□□ -1.98
CLDN3O15551 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN3O15551 Y_RNA.245-201ENST00000364493 95 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms