Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL160314.1-201ENST00000490836 438 ntBASIC2.33□□□□□ -2.04
LSM1O15116 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 LTV1P1-201ENST00000510683 1237 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC024589.1-201ENST00000512207 263 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.33□□□□□ -2.04
LSM1O15116 AC112673.1-201ENST00000513168 575 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC022447.1-201ENST00000515358 464 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 AC010376.1-201ENST00000522101 334 ntBASIC2.33□□□□□ -2.04
LSM1O15116 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.33□□□□□ -2.04
LSM1O15116 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.33□□□□□ -2.04
LSM1O15116 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 AC002545.1-201ENST00000592511 181 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AP000403.1-201ENST00000603349 851 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC090186.1-201ENST00000605991 572 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC067747.1-201ENST00000608026 250 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC009090.3-201ENST00000616553 565 ntBASIC2.33□□□□□ -2.04
LSM1O15116 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
LSM1O15116 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LSM1O15116 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LSM1O15116 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LSM1O15116 MIR1284-201ENST00000408337 120 ntBASIC2.32□□□□□ -2.04
LSM1O15116 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
LSM1O15116 USP9YP26-201ENST00000421008 661 ntBASIC2.32□□□□□ -2.04
LSM1O15116 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM1O15116 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.32□□□□□ -2.04
LSM1O15116 AC063976.3-201ENST00000426849 329 ntBASIC2.32□□□□□ -2.04
LSM1O15116 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.32□□□□□ -2.04
LSM1O15116 FCF1P1-201ENST00000432690 571 ntBASIC2.32□□□□□ -2.04
LSM1O15116 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM1O15116 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.32□□□□□ -2.04
LSM1O15116 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.32□□□□□ -2.04
LSM1O15116 MTCO3P45-201ENST00000443036 613 ntBASIC2.32□□□□□ -2.04
LSM1O15116 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.32□□□□□ -2.04
LSM1O15116 USP9YP10-201ENST00000454868 628 ntBASIC2.32□□□□□ -2.04
LSM1O15116 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.32□□□□□ -2.04
LSM1O15116 AC013267.1-201ENST00000458227 267 ntBASIC2.32□□□□□ -2.04
LSM1O15116 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.32□□□□□ -2.04
LSM1O15116 AC079395.1-201ENST00000510981 262 ntBASIC2.32□□□□□ -2.04
LSM1O15116 SNORA19.3-201ENST00000516165 130 ntBASIC2.32□□□□□ -2.04
LSM1O15116 RNU6-927P-201ENST00000516199 100 ntBASIC2.32□□□□□ -2.04
LSM1O15116 MTND1P36-201ENST00000522384 936 ntBASIC2.32□□□□□ -2.04
LSM1O15116 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM1O15116 AGGF1P5-201ENST00000567900 919 ntBASIC2.32□□□□□ -2.04
LSM1O15116 AC135628.1-201ENST00000568867 534 ntBASIC2.32□□□□□ -2.04
LSM1O15116 AC004987.4-201ENST00000603383 338 ntBASIC2.32□□□□□ -2.04
LSM1O15116 MIR7106-201ENST00000612419 65 ntBASIC2.32□□□□□ -2.04
LSM1O15116 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LSM1O15116 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.32□□□□□ -2.04
LSM1O15116 AC099063.3-201ENST00000642066 185 ntBASIC2.32□□□□□ -2.04
LSM1O15116 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LSM1O15116 AC110491.1-201ENST00000562191 2010 ntBASIC2.32□□□□□ -2.04
LSM1O15116 AL365361.1-201ENST00000566942 3481 ntBASIC2.31□□□□□ -2.04
LSM1O15116 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM1O15116 RPL21P132-201ENST00000331267 462 ntBASIC2.31□□□□□ -2.04
LSM1O15116 RNU6-777P-201ENST00000364265 104 ntBASIC2.31□□□□□ -2.04
LSM1O15116 Y_RNA.311-201ENST00000365068 96 ntBASIC2.31□□□□□ -2.04
LSM1O15116 RNA5SP37-201ENST00000365420 130 ntBASIC2.31□□□□□ -2.04
LSM1O15116 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
LSM1O15116 AL139397.2-201ENST00000404529 772 ntBASIC2.31□□□□□ -2.04
LSM1O15116 NDUFS5P4-201ENST00000412983 318 ntBASIC2.31□□□□□ -2.04
LSM1O15116 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM1O15116 ELOCP14-201ENST00000428070 331 ntBASIC2.31□□□□□ -2.04
LSM1O15116 SRIP2-201ENST00000428470 166 ntBASIC2.31□□□□□ -2.04
LSM1O15116 HMGB1P9-201ENST00000429856 646 ntBASIC2.31□□□□□ -2.04
LSM1O15116 SNRPEP9-201ENST00000436794 238 ntBASIC2.31□□□□□ -2.04
LSM1O15116 ELOCP7-201ENST00000439968 331 ntBASIC2.31□□□□□ -2.04
LSM1O15116 EEF1E1P1-201ENST00000446998 430 ntBASIC2.31□□□□□ -2.04
LSM1O15116 AC020550.1-201ENST00000447385 163 ntBASIC2.31□□□□□ -2.04
LSM1O15116 SNORA31.6-201ENST00000516241 130 ntBASIC2.31□□□□□ -2.04
LSM1O15116 BTF3P12-201ENST00000519620 469 ntBASIC2.31□□□□□ -2.04
LSM1O15116 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.31□□□□□ -2.04
LSM1O15116 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM1O15116 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.31□□□□□ -2.04
LSM1O15116 LARP7P3-201ENST00000579888 337 ntBASIC2.31□□□□□ -2.04
LSM1O15116 MIR3200-201ENST00000580767 85 ntBASIC2.31□□□□□ -2.04
LSM1O15116 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.31□□□□□ -2.04
LSM1O15116 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.31□□□□□ -2.04
LSM1O15116 AL391813.1-201ENST00000603098 260 ntBASIC2.31□□□□□ -2.04
LSM1O15116 AC008121.1-201ENST00000603244 268 ntBASIC2.31□□□□□ -2.04
LSM1O15116 OR2AS2P-201ENST00000606902 342 ntBASIC2.31□□□□□ -2.04
LSM1O15116 AC025594.3-201ENST00000613068 790 ntBASIC2.31□□□□□ -2.04
LSM1O15116 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
LSM1O15116 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LSM1O15116 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM1O15116 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM1O15116 AC010889.1-201ENST00000566193 2666 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AL359851.1-201ENST00000569460 4997 ntBASIC2.3□□□□□ -2.04
LSM1O15116 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM1O15116 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM1O15116 AC062016.1-201ENST00000355719 319 ntBASIC2.3□□□□□ -2.04
LSM1O15116 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
LSM1O15116 ERHP2-201ENST00000402323 299 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.3□□□□□ -2.04
LSM1O15116 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.3□□□□□ -2.04
LSM1O15116 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.3□□□□□ -2.04
LSM1O15116 MTND1P28-201ENST00000435623 950 ntBASIC2.3□□□□□ -2.04
LSM1O15116 AC025750.2-201ENST00000442609 450 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms