Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC244517.12-201ENST00000623581 663 ntBASIC1.81□□□□□ -2.12
UBFD1O14562 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.81□□□□□ -2.12
UBFD1O14562 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBFD1O14562 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
UBFD1O14562 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UBFD1O14562 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 RN7SKP226-201ENST00000364912 300 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AL592310.1-201ENST00000414330 671 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.8□□□□□ -2.12
UBFD1O14562 AC019178.2-201ENST00000423595 505 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 UBE2D3P3-201ENST00000426992 425 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.8□□□□□ -2.12
UBFD1O14562 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.8□□□□□ -2.12
UBFD1O14562 GPM6BP3-201ENST00000442797 145 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBFD1O14562 RPL7P12-201ENST00000446719 750 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 HMGN2P23-201ENST00000456759 269 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AC092798.1-201ENST00000458542 409 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 RNU6-420P-201ENST00000458780 107 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 RNU7-26P-201ENST00000458980 63 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 EIF4EP3-201ENST00000498782 656 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 MRPS36P2-201ENST00000512569 299 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 OR5AQ1P-201ENST00000527596 927 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.8□□□□□ -2.12
UBFD1O14562 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.8□□□□□ -2.12
UBFD1O14562 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.8□□□□□ -2.12
UBFD1O14562 HMGB1P14-201ENST00000557424 591 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.8□□□□□ -2.12
UBFD1O14562 AP001542.2-201ENST00000593141 364 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.8□□□□□ -2.12
UBFD1O14562 AC004853.1-201ENST00000604902 698 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AC016727.1-205ENST00000605437 569 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AC025588.4-201ENST00000615802 908 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AC084824.4-201ENST00000620106 731 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 AC008669.1-201ENST00000565823 2178 ntBASIC1.8□□□□□ -2.12
UBFD1O14562 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
UBFD1O14562 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBFD1O14562 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBFD1O14562 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
UBFD1O14562 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBFD1O14562 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBFD1O14562 RNU6-1035P-201ENST00000384477 107 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 SNORA46.1-201ENST00000391069 153 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 DHFRP6-201ENST00000401776 268 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 AL030996.1-201ENST00000411430 235 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 NDUFB4P7-201ENST00000423198 363 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 RPL7L1P10-201ENST00000427790 463 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 GTF2IP20-201ENST00000431663 360 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 AL512844.2-201ENST00000433990 593 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.79□□□□□ -2.12
UBFD1O14562 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.79□□□□□ -2.12
UBFD1O14562 AC092393.1-201ENST00000439625 742 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.79□□□□□ -2.12
UBFD1O14562 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.79□□□□□ -2.12
UBFD1O14562 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.79□□□□□ -2.12
UBFD1O14562 MOB1AP2-201ENST00000446060 614 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 AC233279.1-201ENST00000455300 423 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 SUMO2P2-201ENST00000456482 255 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 MTCYBP17-201ENST00000503579 789 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 TMEM251P1-201ENST00000503717 318 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.79□□□□□ -2.12
UBFD1O14562 AC093677.1-201ENST00000514414 678 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 AC027338.1-201ENST00000514840 825 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 RNU5A-7P-201ENST00000515979 116 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.79□□□□□ -2.12
UBFD1O14562 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.79□□□□□ -2.12
UBFD1O14562 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.79□□□□□ -2.12
UBFD1O14562 AC011494.1-201ENST00000596454 237 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.79□□□□□ -2.12
UBFD1O14562 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 HMGB1P24-202ENST00000615653 685 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.79□□□□□ -2.12
UBFD1O14562 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
UBFD1O14562 AC022336.2-201ENST00000568966 2538 ntBASIC1.79□□□□□ -2.12
UBFD1O14562 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.78□□□□□ -2.12
UBFD1O14562 SDAD1P2-201ENST00000441308 2028 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 AC080128.1-201ENST00000474389 1917 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 CR848007.1-201ENST00000442354 1699 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 SNRPEP3-201ENST00000338402 276 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 RNU5A-1-201ENST00000362698 116 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 RNU1-105P-201ENST00000363470 161 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 AL513475.1-201ENST00000406602 315 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 RNA5SP247-201ENST00000411181 105 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 SPA17P1-201ENST00000416656 452 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 AC092634.2-201ENST00000428146 1010 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 UBE2V1P13-201ENST00000436983 439 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.78□□□□□ -2.12
UBFD1O14562 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.78□□□□□ -2.12
UBFD1O14562 RPL39P6-201ENST00000448289 150 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 FABP5P13-201ENST00000452144 328 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.78□□□□□ -2.12
UBFD1O14562 RPS15AP17-201ENST00000470598 390 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 AC090453.1-201ENST00000495560 436 ntBASIC1.78□□□□□ -2.12
UBFD1O14562 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms