Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AL023284.1-201ENST00000403956 276 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR1294-201ENST00000408503 142 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR1285-1-201ENST00000408593 84 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR1283-2-201ENST00000408621 87 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU2-43P-201ENST00000410306 190 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 RPL36AP36-201ENST00000418616 301 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 NUP35P1-201ENST00000422734 947 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AL445669.1-201ENST00000426743 755 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AL356320.1-201ENST00000429616 163 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 HMGB1P18-201ENST00000438801 619 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 FABP5P13-201ENST00000452144 328 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 RPL26P9-201ENST00000457466 433 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 RNA5SP112-201ENST00000515937 99 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AL356432.3-201ENST00000568952 465 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR4422-201ENST00000581938 83 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 MTCYBP22-201ENST00000603788 447 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC104763.2-201ENST00000604179 382 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AP000238.1-201ENST00000608759 426 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR7106-201ENST00000612419 65 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC091953.2-201ENST00000623979 160 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC092608.3-201ENST00000625017 386 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC017104.5-201ENST00000637647 639 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 AC006020.1-201ENST00000420179 1854 ntBASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CHKB-CPT1BH3BT56 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 Y_RNA.67-201ENST00000362870 100 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 U3.12-201ENST00000364498 214 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR517C-201ENST00000385103 95 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR758-201ENST00000390227 88 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 BX510359.4-201ENST00000423750 193 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC092648.1-201ENST00000425870 423 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 YME1L1P1-201ENST00000429435 297 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AL354941.1-201ENST00000438600 464 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC107083.1-201ENST00000439643 279 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC003989.2-201ENST00000440224 169 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 DYNLT3P2-201ENST00000442517 295 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 MTND1P33-201ENST00000446251 917 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AL590365.1-201ENST00000450788 243 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC068587.1-201ENST00000483613 781 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC011825.1-201ENST00000484967 388 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC093801.2-201ENST00000503966 1050 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU6-1256P-201ENST00000516539 103 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AK6P1-201ENST00000540219 478 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AL359212.1-201ENST00000556608 614 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC084768.2-201ENST00000622736 221 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC007998.5-201ENST00000622938 237 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 AC098679.5-201ENST00000624394 571 ntBASIC0.74□□□□□ -2.29
CHKB-CPT1BH3BT56 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 UBE2L2-201ENST00000254302 429 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU5A-1-201ENST00000362698 116 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU1-78P-201ENST00000391248 165 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 SNRPEP2-201ENST00000397592 279 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR888-201ENST00000401186 77 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 UBE2V1P4-201ENST00000425374 344 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL512637.2-201ENST00000431287 1256 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 FABP5P14-201ENST00000437273 393 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL109933.2-201ENST00000452651 260 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 HSPE1P6-201ENST00000479457 291 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC104564.1-201ENST00000493028 407 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC139453.3-201ENST00000493276 369 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms