Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 ATG12P2-201ENST00000456830 416 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 snoU13.15-201ENST00000459407 104 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC010285.1-201ENST00000470580 392 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC107222.1-201ENST00000510899 637 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC010625.1-201ENST00000511296 403 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTCYBP43-201ENST00000513621 740 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 SNORA3.4-201ENST00000515969 96 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC100870.1-201ENST00000522035 505 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 OR6C7P-201ENST00000547875 934 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC128657.1-201ENST00000549459 145 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC145350.1-201ENST00000567426 208 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC002400.1-201ENST00000569310 726 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AP000811.1-201ENST00000603803 651 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC055876.5-201ENST00000605667 259 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL031667.3-201ENST00000620124 655 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC022079.1-201ENST00000621546 602 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC131159.1-201ENST00000621854 213 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL356473.1-201ENST00000406203 1408 ntBASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TMX2-CTNND1H3BSU7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNA5SP88-201ENST00000365560 109 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-723P-201ENST00000383973 107 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 SNORA80E-201ENST00000384744 137 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU4-72P-201ENST00000410754 173 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 DPH3P2-201ENST00000422618 250 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 HMGN2P30-201ENST00000423237 256 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 BX119904.4-201ENST00000424402 301 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 LARP1BP3-201ENST00000437229 869 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL354941.1-201ENST00000438600 464 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL133217.1-201ENST00000450980 425 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC098826.2-201ENST00000452011 651 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 SNORD121B-201ENST00000458838 81 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 RPS3AP22-201ENST00000488297 769 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 SRIP1-201ENST00000489235 288 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC006390.1-201ENST00000508068 283 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-237P-201ENST00000515985 71 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-714P-201ENST00000516963 103 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC008015.1-201ENST00000555505 465 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTND3P12-201ENST00000559068 328 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 UBE2L4-201ENST00000587688 464 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC090186.1-201ENST00000605991 572 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC097468.3-201ENST00000607956 456 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR7843-201ENST00000622274 79 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL158801.5-201ENST00000623123 465 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC079248.2-201ENST00000623779 326 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
TMX2-CTNND1H3BSU7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-28P-201ENST00000362378 107 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNA5SP432-201ENST00000362480 116 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 Y_RNA.302-201ENST00000364997 102 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 RN7SKP266-201ENST00000410232 287 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTCO1P39-201ENST00000426148 480 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AP000542.1-201ENST00000448473 371 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC104685.1-201ENST00000502445 371 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC010486.2-201ENST00000505572 483 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC093809.1-201ENST00000509155 340 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms