Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR3974-201ENST00000637126 96 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
NEDD8-MDP1E9PL57 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 DDX10P1-201ENST00000448545 1933 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU1-39P-201ENST00000383897 165 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU6-432P-201ENST00000384196 109 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU1-101P-201ENST00000391171 127 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 SNORA26.8-201ENST00000391306 124 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 RPS4XP8-201ENST00000402039 771 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL021407.1-201ENST00000404531 386 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 USP9YP13-201ENST00000417797 480 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL353777.1-201ENST00000425552 326 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 MED14P1-201ENST00000430517 648 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 RPS23P3-201ENST00000470993 430 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL359273.1-201ENST00000510918 627 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 Y_RNA.688-201ENST00000516565 95 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC060788.1-201ENST00000521318 469 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 MTND4LP18-201ENST00000526864 291 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AP000857.1-201ENST00000532151 543 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC012414.6-201ENST00000568241 401 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL356432.3-201ENST00000568952 465 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 NRBF2P5-201ENST00000603087 788 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC007038.2-201ENST00000608095 740 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC108747.1-201ENST00000609508 535 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 OR10AB1P-201ENST00000609613 938 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AP000254.1-201ENST00000609934 520 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC092140.2-201ENST00000618027 521 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC090617.7-201ENST00000623952 126 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AC084035.1-201ENST00000634543 607 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 MTND4P4-201ENST00000439033 1366 ntBASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD8-MDP1E9PL57 FAM35BP-202ENST00000497389 3337 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU5A-1-201ENST00000362698 116 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU6-223P-201ENST00000362830 107 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU5E-5P-201ENST00000365379 116 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU6-533P-201ENST00000384144 107 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR34A-201ENST00000385130 110 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR514A1-201ENST00000385133 98 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR9-1-201ENST00000385198 89 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AL109755.1-201ENST00000401791 649 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC090960.1-201ENST00000421072 306 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 NDUFB4P7-201ENST00000423198 363 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 RPL27AP8-201ENST00000424277 446 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AL513043.1-201ENST00000439124 535 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 HMGN2P13-201ENST00000476476 274 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC118465.1-201ENST00000513820 1271 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC083760.1-201ENST00000589621 670 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC068790.3-201ENST00000602988 553 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC004908.2-201ENST00000609090 574 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC012360.2-201ENST00000609349 391 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC009570.1-201ENST00000609599 745 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC138749.5-201ENST00000611461 208 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC116165.2-201ENST00000616705 206 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR4275-201ENST00000636486 87 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 LRRC77P-213ENST00000637727 880 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 AC090740.1-201ENST00000623193 2262 ntBASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD8-MDP1E9PL57 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR181A2-201ENST00000384863 110 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 Y_RNA.608-201ENST00000410647 95 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms