Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.51-201ENST00000362725 102 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 MIR320C1-201ENST00000408566 88 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 EZH2P1-201ENST00000431167 291 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 MTND1P28-201ENST00000435623 950 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 MTND4P6-201ENST00000438297 472 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC025750.2-201ENST00000442609 450 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 ARPC3P5-201ENST00000448802 534 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC024589.1-201ENST00000512207 263 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 MTND5P13-201ENST00000513046 1079 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 ERHP1-201ENST00000523006 310 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 HSPE1P20-201ENST00000538133 289 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AL391156.1-201ENST00000554965 554 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 ZNF519P3-201ENST00000557158 1032 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC091489.2-201ENST00000566263 604 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 RPL23AP88-201ENST00000605759 454 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC092354.1-201ENST00000606057 376 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AC135507.1-201ENST00000607214 561 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AL596245.1-201ENST00000618994 362 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AL360181.4-201ENST00000621752 134 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 Z69908.1-201ENST00000622603 247 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 AL049780.3-201ENST00000624612 1583 ntBASIC2.48□□□□□ -2.01
TRIM49D1C9J1S8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-799P-201ENST00000363567 107 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RNU1-51P-201ENST00000365345 176 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 Y_RNA.359-201ENST00000365498 102 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-1027P-201ENST00000383998 107 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-114P-201ENST00000384704 105 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RN7SKP142-201ENST00000411236 328 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RPL23AP39-201ENST00000415533 405 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC244035.1-201ENST00000430042 390 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 DLGAP5P1-201ENST00000430307 464 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC129850.1-201ENST00000436203 508 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 MTCYBP39-201ENST00000437562 491 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC105272.1-201ENST00000438604 198 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 MTCO1P19-201ENST00000443487 500 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 FAM103A2P-201ENST00000444122 354 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 RPL7P36-201ENST00000444633 681 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AL360221.1-201ENST00000445989 335 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 COX6CP12-201ENST00000446748 202 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 SUMO2P2-201ENST00000456482 255 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC091965.2-201ENST00000512324 613 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC138761.3-201ENST00000579993 334 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC091965.4-201ENST00000607691 587 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 MIR7844-201ENST00000616161 122 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AL357080.1-201ENST00000617394 239 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 AC112204.3-201ENST00000623822 332 ntBASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49D1C9J1S8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.46□□□□□ -2.01
TRIM49D1C9J1S8 AC097714.1-201ENST00000511272 1647 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 OR5J1P-201ENST00000313544 939 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 MIR21-201ENST00000362134 72 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-297P-201ENST00000384636 107 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 RPS20P2-201ENST00000402520 389 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AL356421.1-201ENST00000403255 413 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 FAT1P1-201ENST00000406588 507 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 BTF3L4P1-201ENST00000413813 468 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 USP9YP13-201ENST00000417797 480 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms