Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC073587.1-201ENST00000447093 876 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 ISCUP1-201ENST00000454451 448 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 UQCRHP4-201ENST00000471686 272 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 SNRPCP3-201ENST00000474888 476 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.51□□□□□ -1.53
USP17L3A6NCW0 RNU2-53P-201ENST00000516257 147 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.51□□□□□ -1.53
USP17L3A6NCW0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.51□□□□□ -1.53
USP17L3A6NCW0 TRAV32-201ENST00000553993 340 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 MIR5188-201ENST00000583467 113 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.51□□□□□ -1.53
USP17L3A6NCW0 AC010300.1-201ENST00000600671 5134 ntBASIC5.51□□□□□ -1.53
USP17L3A6NCW0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 Y_RNA.33-201ENST00000362591 102 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RN7SKP224-201ENST00000364140 325 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RNU6-512P-201ENST00000364438 103 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 Y_RNA.276-201ENST00000364732 109 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 MIR625-201ENST00000385047 85 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AL513475.1-201ENST00000406602 315 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 EIF4A1P3-201ENST00000411521 244 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 EIF4HP2-201ENST00000424380 563 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC004938.1-201ENST00000438468 308 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RPL21P2-201ENST00000440049 481 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RPS24P13-201ENST00000442520 397 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AL049874.1-201ENST00000489560 388 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC022493.1-201ENST00000492984 337 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RNU6-408P-201ENST00000515910 100 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RNA5SP471-201ENST00000516971 106 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AP003730.1-201ENST00000524605 285 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC106785.1-201ENST00000565935 262 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 HNRNPCP4-201ENST00000571636 900 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC006363.1-201ENST00000603806 463 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 AC098826.3-201ENST00000603823 466 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RNA5SP108-201ENST00000605921 117 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 MIR3653-201ENST00000625572 110 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.5□□□□□ -1.53
USP17L3A6NCW0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP17L3A6NCW0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 Y_RNA.48-201ENST00000362710 103 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RNU6-1167P-201ENST00000363227 94 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RNU1-64P-201ENST00000365443 163 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 SNORA48.7-201ENST00000391302 135 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RPL21P1-201ENST00000399532 476 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC006946.1-201ENST00000429106 328 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 MTCO3P8-201ENST00000453691 755 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC133473.1-201ENST00000455173 299 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 MLLT10P2-201ENST00000506434 249 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC107222.1-201ENST00000510899 637 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RNU1-86P-201ENST00000516108 154 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RNA5SP249-201ENST00000516127 99 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 Y_RNA.687-201ENST00000516558 91 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RNU1-107P-201ENST00000516617 154 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AP000889.1-201ENST00000530968 660 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC006600.1-201ENST00000572529 153 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 FAM60BP-201ENST00000578364 658 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RN7SL176P-201ENST00000580352 264 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 HMGB1P24-202ENST00000615653 685 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 RNA5SP196-201ENST00000625967 102 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 AC093671.1-201ENST00000624981 2929 ntBASIC5.49□□□□□ -1.53
USP17L3A6NCW0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.49□□□□□ -1.53
USP17L3A6NCW0 MFSD8-242ENST00000641690 4199 ntBASIC5.48□□□□□ -1.53
USP17L3A6NCW0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP17L3A6NCW0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
USP17L3A6NCW0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
USP17L3A6NCW0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP17L3A6NCW0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.48□□□□□ -1.53
USP17L3A6NCW0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP17L3A6NCW0 Y_RNA.461-201ENST00000384263 103 ntBASIC5.48□□□□□ -1.53
USP17L3A6NCW0 MIR514A1-201ENST00000385133 98 ntBASIC5.48□□□□□ -1.53
USP17L3A6NCW0 MIR134-201ENST00000385258 73 ntBASIC5.48□□□□□ -1.53
USP17L3A6NCW0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.48□□□□□ -1.53
USP17L3A6NCW0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms