Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNA5SP385-201ENST00000515947 110 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 SNORA3.4-201ENST00000515969 96 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 RN7SKP282-201ENST00000516824 299 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 HSPE1P7-201ENST00000604681 321 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 AP002826.1-201ENST00000608835 315 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 AC107294.1-201ENST00000609524 467 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 AC063944.3-201ENST00000609969 533 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 AC131159.1-201ENST00000621854 213 ntBASIC2.59□□□□□ -1.99
SMIM28A0A1B0GU29 AC233263.6-201ENST00000631132 1963 ntBASIC2.59□□□□□ -2
SMIM28A0A1B0GU29 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SMIM28A0A1B0GU29 AC006378.2-201ENST00000623178 2476 ntBASIC2.59□□□□□ -2
SMIM28A0A1B0GU29 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -2
SMIM28A0A1B0GU29 AC011460.1-201ENST00000636268 1834 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 Y_RNA.18-201ENST00000362461 102 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 DYNLT3P1-201ENST00000378574 347 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 SNORA41-201ENST00000384675 132 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AL162578.1-201ENST00000406202 378 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 MIR1305-201ENST00000408300 86 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 TPMTP3-201ENST00000411928 735 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 RPL7P10-201ENST00000417407 739 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 HIGD1AP2-201ENST00000446367 280 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 TRBV12-1-201ENST00000479785 344 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC135721.1-201ENST00000497954 479 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 MTND5P4-201ENST00000514978 288 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 RNU6-1256P-201ENST00000516539 103 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 HMGB1P41-201ENST00000520234 440 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC068587.4-201ENST00000533893 186 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 MIR3921-201ENST00000577308 85 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC091965.4-201ENST00000607691 587 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AC107214.2-201ENST00000608204 634 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 API5P2-201ENST00000397055 1498 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 CCT4P2-201ENST00000233836 1548 ntBASIC2.58□□□□□ -2
SMIM28A0A1B0GU29 RNA5SP139-201ENST00000364340 117 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 SNORD114-30-201ENST00000364448 72 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 SNORA23-201ENST00000365128 182 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 MIR19A-201ENST00000384878 82 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 RNA5SP252-201ENST00000391131 119 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 CCNG1P1-201ENST00000406783 885 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 SNORA3.2-201ENST00000408221 125 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 RNU6-516P-201ENST00000411381 104 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL359704.1-201ENST00000411586 781 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 HMGB1P11-201ENST00000413899 637 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC092573.2-201ENST00000434546 243 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC004263.1-201ENST00000479327 332 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL135752.1-201ENST00000479477 471 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL359273.1-201ENST00000510918 627 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 OR5BN1P-201ENST00000532955 829 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL157394.1-201ENST00000562983 1224 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC002400.1-201ENST00000569310 726 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC011260.1-201ENST00000578420 472 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 DUXAP4-201ENST00000603046 613 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL357094.1-201ENST00000603845 844 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC009268.2-201ENST00000621925 457 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AL356266.1-201ENST00000623311 483 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC112204.3-201ENST00000623822 332 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC090617.7-201ENST00000623952 126 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC005832.2-201ENST00000538921 1430 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 AC008568.2-201ENST00000623862 2313 ntBASIC2.57□□□□□ -2
SMIM28A0A1B0GU29 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC092125.1-201ENST00000562568 1995 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC091564.4-201ENST00000533934 2194 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 RNU6-1197P-201ENST00000391183 107 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 RN7SKP140-201ENST00000411196 284 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 NDUFB4P7-201ENST00000423198 363 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 TAAR7P-201ENST00000436141 242 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 GDI2P2-201ENST00000445131 608 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 ATG12P2-201ENST00000456830 416 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms