Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL159972.1-201ENST00000625150 448 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 CTSLP2-204ENST00000629029 392 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC243829.7-201ENST00000633081 225 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 AC091948.2-201ENST00000636510 279 ntBASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
USH1CQ9Y6N9 RNU6-28P-201ENST00000362378 107 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 RSL24D1P4-201ENST00000400938 484 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 BTF3P8-201ENST00000414577 526 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 MTCO1P3-201ENST00000429327 192 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 RN7SL274P-201ENST00000492268 272 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 MIR3945-201ENST00000581853 98 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AL161729.4-201ENST00000604650 476 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 MTND4LP5-201ENST00000605152 292 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AL390208.1-201ENST00000605885 644 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC005332.6-201ENST00000613178 446 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AL603758.1-201ENST00000618654 241 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC025034.2-201ENST00000623264 286 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC068057.2-201ENST00000624047 895 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC107982.1-201ENST00000507171 1300 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AL356473.1-201ENST00000406203 1408 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 AC005539.1-201ENST00000443768 1479 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 ELF2P3-201ENST00000445099 1506 ntBASIC2.07□□□□□ -2.08
USH1CQ9Y6N9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 RNU5E-8P-201ENST00000363502 116 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 RNU2-49P-201ENST00000410666 184 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 MTCO2P5-201ENST00000422621 426 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 ZNF863P-201ENST00000426746 417 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AC092634.2-201ENST00000428146 1010 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 OR10R1P-201ENST00000441524 1141 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 RNA5SP291-201ENST00000517222 105 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 RNU6-840P-201ENST00000517275 65 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AGGF1P5-201ENST00000567900 919 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AC005776.1-201ENST00000603164 290 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AL590808.1-201ENST00000618696 141 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 AC120349.2-201ENST00000625002 298 ntBASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH1CQ9Y6N9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 Y_RNA.548-201ENST00000384656 105 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AL109755.1-201ENST00000401791 649 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 RNU2-42P-201ENST00000410697 113 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 PTP4A1P7-201ENST00000423476 514 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 RPS15AP5-201ENST00000436276 388 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 ARF4P4-201ENST00000439608 520 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC026414.1-201ENST00000504046 698 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC022447.3-201ENST00000506865 495 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 RNA5SP281-201ENST00000516504 135 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 MTCO3P15-201ENST00000526563 574 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AL138976.2-201ENST00000563989 694 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC005951.2-201ENST00000576282 495 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AL449363.1-201ENST00000617815 186 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC002550.2-201ENST00000621246 394 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 AC012640.5-201ENST00000623897 319 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 DDX10P1-201ENST00000448545 1933 ntBASIC2.05□□□□□ -2.08
USH1CQ9Y6N9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 RNU6-140P-201ENST00000384566 108 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 RNU6-920P-201ENST00000410926 92 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AL030996.1-201ENST00000411430 235 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 OOSP1P1-201ENST00000423265 274 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC007560.1-201ENST00000426912 237 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms