Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
DNMT3AQ9Y6K1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.3□□□□□ -1.56
DNMT3AQ9Y6K1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 SNORA22-201ENST00000383907 134 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 RNU1-77P-201ENST00000390868 162 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 RNU6-607P-201ENST00000411283 108 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 TOMM20P4-201ENST00000427861 435 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 MTND3P9-201ENST00000429526 346 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AL357134.1-201ENST00000445848 426 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AL360271.2-201ENST00000447710 161 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC022133.1-201ENST00000490961 571 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC022968.1-201ENST00000567372 442 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC002545.1-201ENST00000592511 181 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC105254.2-201ENST00000603636 436 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AC114947.2-201ENST00000565748 2125 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
DNMT3AQ9Y6K1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 UBE2L2-201ENST00000254302 429 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 DEFB108F-201ENST00000344638 222 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 Y_RNA.27-201ENST00000362540 103 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 SNORA67-201ENST00000384423 137 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 RNU6-790P-201ENST00000384479 105 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 SNORA20-201ENST00000384662 132 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 MIR578-201ENST00000384828 96 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 HSPA8P15-201ENST00000401676 786 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 RN7SKP284-201ENST00000411002 343 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 RNU2-61P-201ENST00000411069 191 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 RPS12P23-201ENST00000419579 400 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AL451062.2-201ENST00000427515 271 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 KNOP1P3-201ENST00000446933 426 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 Y_RNA.638-201ENST00000459374 113 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 MTND3P25-201ENST00000509243 135 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AL671862.1-201ENST00000515851 349 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AP004371.1-201ENST00000525240 214 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AP003327.1-201ENST00000529684 127 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AP004607.2-201ENST00000533949 322 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 MIR5701-3-201ENST00000578890 82 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 MIR5701-1-201ENST00000585138 82 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 OR1M4P-201ENST00000589199 287 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AL158827.2-201ENST00000602494 330 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AC024940.4-201ENST00000605507 246 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 MIR5701-2-201ENST00000615634 82 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 MIR6133-201ENST00000617057 108 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 MIR6826-201ENST00000617808 98 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 Y_RNA.778-201ENST00000620203 90 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 AL691447.3-201ENST00000635020 330 ntBASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
DNMT3AQ9Y6K1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 SNORD73A-201ENST00000386062 65 ntBASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 LAP3P1-201ENST00000403648 294 ntBASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 AL033519.2-201ENST00000403958 392 ntBASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 U3.35-201ENST00000408405 208 ntBASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 AL353621.1-201ENST00000418219 243 ntBASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 AC244098.2-201ENST00000422068 99 ntBASIC5.27□□□□□ -1.57
DNMT3AQ9Y6K1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms