| BACE2 | Q9Y5Z0 | AP001172.2-201 | ENST00000602454 | 467 nt | TSL 5 BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC007938.3-201 | ENST00000604965 | 623 nt | BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC106900.2-201 | ENST00000604994 | 317 nt | BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PISRT1.1-201 | ENST00000616930 | 107 nt | BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL353748.2-201 | ENST00000622148 | 471 nt | BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | MIR548A1HG-201 | ENST00000636739 | 558 nt | TSL 4 BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | SYT16-205 | ENST00000568344 | 13978 nt | APPRIS P1 TSL 1 (best) BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PUS7L-201 | ENST00000344862 | 13593 nt | APPRIS P1 TSL 1 (best) BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | FAM169A-203 | ENST00000510496 | 5810 nt | TSL 5 BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | MTUS1-228 | ENST00000544260 | 3650 nt | TSL 2 BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | ADGRL3-202 | ENST00000504896 | 4816 nt | TSL 5 BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | ATP2C1-212 | ENST00000507488 | 3579 nt | APPRIS ALT2 TSL 2 BASIC | 4.52 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | FGF7-202 | ENST00000560270 | 1688 nt | TSL 1 (best) BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | CYP3A4-201 | ENST00000336411 | 2153 nt | APPRIS P1 TSL 1 (best) BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | MECOM-219 | ENST00000628990 | 4835 nt | APPRIS P3 TSL 1 (best) BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | LINC01630-206 | ENST00000635103 | 4292 nt | TSL 5 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | MMP16-201 | ENST00000286614 | 11558 nt | APPRIS P1 TSL 1 (best) BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | GABRG2-217 | ENST00000639384 | 5360 nt | TSL 5 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RACGAP1-202 | ENST00000427314 | 3229 nt | APPRIS P1 TSL 1 (best) BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | ZNF12-203 | ENST00000404360 | 4474 nt | TSL 1 (best) BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | ZNF208-207 | ENST00000609966 | 3653 nt | TSL 5 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | LINC01902-202 | ENST00000636983 | 4607 nt | TSL 5 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | MIR372-201 | ENST00000362225 | 67 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | SNORD3E-201 | ENST00000362899 | 217 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.133-201 | ENST00000363428 | 110 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC117470.1-201 | ENST00000381974 | 330 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-463P-201 | ENST00000384340 | 107 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-628P-201 | ENST00000410675 | 107 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AP000473.1-201 | ENST00000413645 | 550 nt | TSL 3 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC010163.2-201 | ENST00000416341 | 381 nt | TSL 2 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC108032.1-201 | ENST00000416706 | 207 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC112715.1-201 | ENST00000445534 | 350 nt | TSL 3 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL035666.1-201 | ENST00000446195 | 348 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL357873.1-201 | ENST00000449215 | 282 nt | TSL 3 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC022445.1-201 | ENST00000457499 | 408 nt | TSL 3 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNA5SP246-201 | ENST00000458909 | 119 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | TIPARP-AS1-202 | ENST00000478005 | 554 nt | TSL 4 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC097473.1-201 | ENST00000508142 | 408 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC104136.1-201 | ENST00000512969 | 394 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | SNORA31.3-201 | ENST00000516029 | 96 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC090151.1-201 | ENST00000520784 | 730 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | CYCSP27-201 | ENST00000527643 | 293 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC022081.1-201 | ENST00000537327 | 433 nt | TSL 2 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC006064.5-201 | ENST00000541782 | 248 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | LINC01584-202 | ENST00000563990 | 852 nt | TSL 3 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC005951.2-201 | ENST00000576282 | 495 nt | BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC022706.1-202 | ENST00000585387 | 540 nt | TSL 3 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RBMS3-205 | ENST00000434693 | 8540 nt | TSL 5 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | FAM107B-229 | ENST00000622567 | 3510 nt | APPRIS P1 TSL 2 BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PKHD1-202 | ENST00000371117 | 16282 nt | APPRIS P4 TSL 1 (best) BASIC | 4.51 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | CFL2-202 | ENST00000341223 | 3131 nt | APPRIS P1 TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | XIST-204 | ENST00000429829 | 19275 nt | TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | TMEM68-218 | ENST00000617782 | 2477 nt | APPRIS P1 TSL 5 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PPP1R9A-205 | ENST00000424654 | 4058 nt | TSL 5 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | INPP4B-220 | ENST00000513000 | 8831 nt | APPRIS P1 TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC074029.4-201 | ENST00000624796 | 1859 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.5-201 | ENST00000362334 | 102 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-1309P-201 | ENST00000363305 | 108 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | DEFB110-201 | ENST00000371148 | 384 nt | APPRIS P3 TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-890P-201 | ENST00000384121 | 107 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-1106P-201 | ENST00000390845 | 107 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-328P-201 | ENST00000390887 | 106 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL590704.1-201 | ENST00000402856 | 794 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RN7SKP27-201 | ENST00000410684 | 333 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC007349.1-201 | ENST00000419326 | 587 nt | TSL 4 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL355989.1-202 | ENST00000419406 | 408 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | MYCBP2-AS1-201 | ENST00000422231 | 519 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL358176.2-201 | ENST00000425769 | 204 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL117339.2-201 | ENST00000430475 | 180 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC008264.1-201 | ENST00000447612 | 367 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL359073.1-201 | ENST00000448036 | 403 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL080313.2-201 | ENST00000456440 | 489 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC004692.2-202 | ENST00000458680 | 478 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC121154.1-201 | ENST00000507299 | 430 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | LINC02230-201 | ENST00000511174 | 301 nt | TSL 5 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU6-1137P-201 | ENST00000517073 | 99 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNU1-54P-201 | ENST00000517181 | 120 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC009902.1-201 | ENST00000519351 | 183 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | ERHP1-201 | ENST00000523006 | 310 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC113192.1-201 | ENST00000527270 | 321 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL163973.3-201 | ENST00000547093 | 430 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AL121603.1-201 | ENST00000553815 | 142 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PSMA4-205 | ENST00000558281 | 773 nt | TSL 3 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC012100.2-201 | ENST00000558317 | 304 nt | TSL 5 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC068397.1-201 | ENST00000560337 | 531 nt | TSL 2 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | RNA5SP108-201 | ENST00000605921 | 117 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC009229.3-201 | ENST00000608056 | 282 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC083806.3-201 | ENST00000614016 | 455 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AC010205.1-201 | ENST00000616668 | 449 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | 7SK.10-201 | ENST00000621414 | 298 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | OR2L3-201 | ENST00000359959 | 2792 nt | APPRIS P1 BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PRO1804-201 | ENST00000623780 | 2050 nt | BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PTPN13-202 | ENST00000411767 | 8119 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | PTPN13-201 | ENST00000316707 | 7546 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | AMY2A-201 | ENST00000414303 | 1634 nt | APPRIS P1 TSL 1 (best) BASIC | 4.5 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | TPRG1-201 | ENST00000345063 | 5479 nt | APPRIS P1 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | CSPP1-203 | ENST00000519668 | 3715 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | EEF1A1-211 | ENST00000615060 | 3508 nt | TSL 5 BASIC | 4.49 | □□□□□ -1.69 | | |
| BACE2 | Q9Y5Z0 | EMCN-201 | ENST00000296420 | 4037 nt | APPRIS P3 TSL 1 (best) BASIC | 4.49 | □□□□□ -1.69 | | |