Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORA31.1-201ENST00000515993 133 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 SNORA31.5-201ENST00000516190 133 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 SNORA40.12-201ENST00000516329 111 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL138889.2-201ENST00000603883 242 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL670379.4-201ENST00000605279 254 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 MIR15A-201ENST00000607334 83 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC091152.2-201ENST00000591628 2569 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-996P-201ENST00000365438 107 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 MIR591-201ENST00000385290 95 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-1158P-201ENST00000391167 107 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 CISD1P1-201ENST00000393907 327 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RN7SKP156-201ENST00000410308 342 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU2-68P-201ENST00000410878 191 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 MTCYBP5-201ENST00000423752 1135 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 USP9YP18-201ENST00000425912 695 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL23AP82-202ENST00000427528 469 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 Z99127.3-201ENST00000448158 395 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AL500522.2-201ENST00000448562 343 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 FDX1P2-201ENST00000450769 375 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 CECR9-201ENST00000453421 199 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 U3.44-201ENST00000458938 192 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL21P8-201ENST00000465083 535 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC109927.2-201ENST00000506416 303 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 MTND1P5-201ENST00000517906 940 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AL360157.1-201ENST00000565962 87 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 MIR4703-201ENST00000577728 79 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AP001596.2-201ENST00000608410 312 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 FTX_3.1-201ENST00000610451 147 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC099506.2-201ENST00000623074 221 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 Z99571.1-201ENST00000636677 394 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 U6.98-201ENST00000637157 84 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 AC005183.1-201ENST00000603687 1979 ntBASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
COL4A3BPQ9Y5P4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU4-12P-201ENST00000365233 139 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 U1.1-201ENST00000384101 164 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 SNORA48.7-201ENST00000391302 135 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AL591416.1-201ENST00000404015 867 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 SNORA3.3-201ENST00000408712 125 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL30P2-201ENST00000414021 291 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 OR6C66P-201ENST00000414917 930 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 RAC1P3-201ENST00000416129 580 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC068533.1-201ENST00000418542 415 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 ELOCP23-201ENST00000452014 332 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AL163973.1-201ENST00000484753 577 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 EIF4EP3-201ENST00000498782 656 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC117522.3-201ENST00000507974 584 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 RBBP4P6-201ENST00000508098 202 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 RNA5SP165-201ENST00000517142 115 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 OR5AQ1P-201ENST00000527596 927 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC087499.8-201ENST00000578406 226 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC008752.3-201ENST00000588113 712 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC245389.1-201ENST00000605141 529 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC004805.2-201ENST00000605382 482 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC093788.1-201ENST00000609356 927 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC090517.2-201ENST00000614966 680 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AL354950.2-201ENST00000617939 290 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 XIST_intron.1-201ENST00000619444 68 ntBASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A3BPQ9Y5P4 MTND4P14-201ENST00000435799 1354 ntBASIC4.28□□□□□ -1.72
COL4A3BPQ9Y5P4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms