Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC116337.2-201ENST00000477662 156 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 RPF2P2-201ENST00000504693 896 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC010486.1-201ENST00000511793 424 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 RAC1P5-201ENST00000512182 576 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC116347.2-201ENST00000514912 523 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC087373.1-201ENST00000524920 491 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AL133153.1-201ENST00000557756 303 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC008507.1-201ENST00000587506 734 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 TPMTP1-201ENST00000592307 737 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 uc_338.25-201ENST00000613756 156 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 Z99129.2-201ENST00000619967 314 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 AC138915.1-201ENST00000565427 1685 ntBASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PCDHGA1Q9Y5H4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
PCDHGA1Q9Y5H4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AL445523.1-201ENST00000451184 1362 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR449A-201ENST00000362113 91 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-270P-201ENST00000364131 105 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-217P-201ENST00000384164 104 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AL356968.1-201ENST00000416622 474 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AL451054.2-201ENST00000420896 202 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 ZNF863P-201ENST00000426746 417 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 HMGB3P11-201ENST00000440127 604 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 Z96811.1-201ENST00000445880 108 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC125238.1-201ENST00000448842 249 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC013267.1-201ENST00000458227 267 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AL135752.1-201ENST00000479477 471 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC021205.2-201ENST00000480069 347 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AL160314.1-201ENST00000490836 438 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC009901.1-201ENST00000506703 541 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 RN7SKP272-201ENST00000516988 232 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC106038.2-201ENST00000520706 568 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AP000907.2-201ENST00000530827 353 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AP000857.1-201ENST00000532151 543 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC093012.1-202ENST00000549403 582 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 GTF3AP2-201ENST00000557014 266 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC068790.3-201ENST00000602988 553 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC007038.2-201ENST00000608095 740 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC004696.1-201ENST00000614345 607 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC002064.3-201ENST00000623448 346 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AF246928.1-201ENST00000623768 87 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 AC093591.3-201ENST00000634516 308 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 MTND1P37-201ENST00000636562 264 ntBASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA1Q9Y5H4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU5F-6P-201ENST00000362979 116 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 SNORA54-201ENST00000384281 123 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 RPS20P2-201ENST00000402520 389 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL7P25-201ENST00000404151 721 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 MTND2P18-201ENST00000419962 1030 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC099548.1-201ENST00000421443 426 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AL365496.1-201ENST00000426885 215 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC022018.1-201ENST00000430685 241 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AL139132.1-201ENST00000431587 344 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC009969.1-201ENST00000438726 172 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 MTND1P26-201ENST00000440488 538 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC016696.1-201ENST00000446949 318 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 ELOCP30-201ENST00000447108 299 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 KATNBL1P6-201ENST00000453433 915 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC087588.1-201ENST00000462203 316 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms