Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RPS23P3-201ENST00000470993 430 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 RNA5SP290-201ENST00000517133 127 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 PSMA2P1-201ENST00000526365 646 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC007424.1-203ENST00000554613 687 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 MIR4286-201ENST00000580651 93 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC013553.2-201ENST00000604244 589 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AL161798.1-201ENST00000604630 131 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA6Q9Y5G7 AP001486.2-201ENST00000561652 5113 ntBASIC4.03□□□□□ -1.77
PCDHGA6Q9Y5G7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 MIR372-201ENST00000362225 67 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 Y_RNA.399-201ENST00000383955 105 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 Y_RNA.534-201ENST00000384599 112 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 MIR493-201ENST00000385254 89 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 RNU6-1009P-201ENST00000390996 107 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AL162578.1-201ENST00000406202 378 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 RNA5SP36-201ENST00000410197 133 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 RN7SKP53-201ENST00000411337 315 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 TMEM167AP1-201ENST00000423409 219 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AL117339.2-201ENST00000430475 180 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 GPM6BP2-201ENST00000432046 144 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 HSPD1P21-201ENST00000436541 245 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 Z82210.1-201ENST00000440037 231 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 GPM6BP1-201ENST00000446387 144 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AC091153.1-201ENST00000466297 402 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 RPS26P15-201ENST00000488067 348 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 MTCO2P30-201ENST00000503662 364 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 RNA5SP519-201ENST00000516480 119 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 PSMA3P-201ENST00000555485 635 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AC006130.2-201ENST00000586202 326 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AL354984.3-201ENST00000604803 325 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 RNU4-89P-201ENST00000607443 133 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 U2.17-201ENST00000611454 95 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 MIR4727-201ENST00000622232 55 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AL445363.3-201ENST00000623080 671 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 AC008785.1-201ENST00000624475 456 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.02□□□□□ -1.77
PCDHGA6Q9Y5G7 ZNF962P-201ENST00000443465 3140 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC008725.1-201ENST00000605123 2263 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RNU6-512P-201ENST00000364438 103 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RNU4-20P-201ENST00000365601 151 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RNA5SP283-201ENST00000365604 119 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RNU6-1127P-201ENST00000384580 107 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 Y_RNA.530-201ENST00000384587 101 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AL583835.1-201ENST00000399570 407 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RNA5SP306-201ENST00000411087 107 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RPL35AP12-201ENST00000425362 338 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC007919.1-201ENST00000429380 217 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RPL7P12-201ENST00000446719 750 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AL121877.1-201ENST00000453704 622 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 HMGN2P16-201ENST00000456802 261 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RNU6-1208P-201ENST00000459588 107 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC004801.2-202ENST00000463559 283 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 RPL35AP15-201ENST00000468042 339 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC008628.2-201ENST00000502605 298 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC025554.1-201ENST00000505641 188 ntBASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA6Q9Y5G7 AL352979.3-201ENST00000553515 247 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms