Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU2-49P-201ENST00000410666 184 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 HMGB1P11-201ENST00000413899 637 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 VPS26BP1-201ENST00000417155 755 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 BTF3L4P3-201ENST00000418879 476 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 SKA2P1-201ENST00000425592 390 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 HMGB1P9-201ENST00000429856 646 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL671855.1-201ENST00000446875 1203 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 NIPA2P5-201ENST00000452282 464 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC083906.5-201ENST00000503722 328 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 SNORA31.3-201ENST00000516029 96 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 PSMA2P1-201ENST00000526365 646 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC098826.3-201ENST00000603823 466 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL031281.1-201ENST00000604049 488 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC112187.2-201ENST00000604345 283 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL161798.1-201ENST00000604630 131 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC013244.3-201ENST00000605614 388 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC013562.2-201ENST00000611632 603 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC110491.1-201ENST00000562191 2010 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 ELF2P3-201ENST00000445099 1506 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 RNY4P24-201ENST00000362735 96 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC078974.1-201ENST00000411597 223 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC096649.2-201ENST00000416186 393 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 ZNF90P2-204ENST00000419323 1075 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC005300.1-201ENST00000428401 373 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 FCF1P1-201ENST00000432690 571 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC098831.1-201ENST00000440661 216 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 DPPA3P1-201ENST00000448050 469 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 CECR9-201ENST00000453421 199 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC108059.3-201ENST00000456388 214 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC105252.1-201ENST00000503089 286 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 HMGB3P3-201ENST00000510526 400 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 RNA5SP471-201ENST00000516971 106 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 RNU1-45P-201ENST00000517191 141 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 MTATP6P15-201ENST00000527233 835 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 H3F3AP1-201ENST00000559984 334 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 MIR4700-201ENST00000578311 74 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 NRBF2P5-201ENST00000603087 788 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL161756.2-201ENST00000604597 246 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL607023.1-201ENST00000620045 248 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL136313.1-201ENST00000624804 202 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AC012442.3-202ENST00000636742 206 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 AL137003.2-201ENST00000606924 2538 ntBASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KCNIP3Q9Y2W7 MTND4P16-201ENST00000466108 1367 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 RNU1-100P-201ENST00000365255 165 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 RNU1-73P-201ENST00000383971 164 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 SNORA80E-201ENST00000384744 137 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 RPL26P27-201ENST00000414397 437 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 ISCA1P1-201ENST00000426679 387 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 Z73417.1-201ENST00000447373 778 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 FABP5P15-201ENST00000453566 214 ntBASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.26□□□□□ -2.05
KCNIP3Q9Y2W7 RPF2P2-201ENST00000504693 896 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms