Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AL590664.1-201ENST00000448065 339 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 AC108145.1-201ENST00000503770 153 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 HMGB3P17-201ENST00000504195 649 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 AC093815.1-201ENST00000508637 280 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 AC025465.3-201ENST00000510570 311 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 AC008958.1-201ENST00000511047 682 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 AC109329.1-201ENST00000518744 317 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 AC133555.2-201ENST00000550213 292 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 RN7SL290P-201ENST00000578661 300 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 MIR5701-3-201ENST00000578890 82 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 MIR4715-201ENST00000584117 79 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 MIR5701-1-201ENST00000585138 82 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 MIR5701-2-201ENST00000615634 82 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NOD1Q9Y239 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NOD1Q9Y239 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
NOD1Q9Y239 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NOD1Q9Y239 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NOD1Q9Y239 AL139811.1-201ENST00000424779 2299 ntBASIC5.4□□□□□ -1.55
NOD1Q9Y239 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
NOD1Q9Y239 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NOD1Q9Y239 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
NOD1Q9Y239 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NOD1Q9Y239 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NOD1Q9Y239 AC100778.3-201ENST00000580060 1750 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 OR4G2P-202ENST00000641004 1759 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NOD1Q9Y239 RN7SKP145-201ENST00000363291 303 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 AL158156.1-201ENST00000422509 473 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 AL159987.2-201ENST00000432754 307 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 LINC01399-202ENST00000458450 244 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 RPL7P5-201ENST00000471472 736 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 TRBVB-201ENST00000477100 408 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 RNU6-911P-201ENST00000516523 104 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 AL512605.2-201ENST00000592972 256 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 AC009314.1-201ENST00000603871 304 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 AL161798.1-201ENST00000604630 131 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NOD1Q9Y239 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NOD1Q9Y239 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NOD1Q9Y239 NCAPGP1-201ENST00000505112 1814 ntBASIC5.39□□□□□ -1.55
NOD1Q9Y239 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NOD1Q9Y239 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
NOD1Q9Y239 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 Y_RNA.117-201ENST00000363294 101 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 RNU6-595P-201ENST00000363944 107 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 RNU6-384P-201ENST00000364900 104 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 RNU6-1062P-201ENST00000383908 107 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 Y_RNA.478-201ENST00000384358 107 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 U3.30-201ENST00000391308 210 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 EIF4EP2-201ENST00000422816 654 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 MRPS21P2-201ENST00000424704 264 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 RPL21P91-201ENST00000429231 479 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 U8.21-201ENST00000459536 136 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 RN7SKP40-201ENST00000517211 242 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 AC034114.1-201ENST00000520293 285 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 HNRNPCP4-201ENST00000571636 900 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 MIR5696-201ENST00000578474 85 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 HMGB2P1-201ENST00000591146 634 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 AP000787.2-201ENST00000604432 568 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 AC004852.3-201ENST00000614131 326 ntBASIC5.38□□□□□ -1.55
NOD1Q9Y239 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.38□□□□□ -1.55
NOD1Q9Y239 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NOD1Q9Y239 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms