Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 Y_RNA.27-201ENST00000362540 103 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 SNORA73.1-201ENST00000363107 205 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 Y_RNA.143-201ENST00000363520 106 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-1056P-201ENST00000383996 107 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-80P-201ENST00000384195 107 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-387P-201ENST00000411331 105 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 UBE2V1P4-201ENST00000425374 344 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 RPL23AP74-201ENST00000437246 471 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 RPL30P10-201ENST00000488148 337 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 RBBP4P6-201ENST00000508098 202 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-202P-201ENST00000515998 96 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 SNORD116-25-201ENST00000516517 92 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 MIR4277-201ENST00000578298 84 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 MIR3936-201ENST00000584304 110 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AC008521.1-201ENST00000587471 187 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AC005191.1-201ENST00000603950 358 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AL008718.3-201ENST00000610217 321 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 MIR6853-201ENST00000619642 74 ntBASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 AP001148.1-201ENST00000624124 2359 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 SALL4P2-201ENST00000423288 2910 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-595P-201ENST00000363944 107 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 Y_RNA.331-201ENST00000365267 102 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 UBBP2-201ENST00000376781 231 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 MIR129-1-201ENST00000384972 72 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 U3.42-201ENST00000408746 214 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RNA5SP296-201ENST00000410523 111 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RPS12P5-201ENST00000423449 371 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 MTCO1P39-201ENST00000426148 480 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC092423.1-201ENST00000430165 186 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RPL7L1P1-201ENST00000448259 785 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AL137159.1-201ENST00000452808 512 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC021205.1-201ENST00000468797 348 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AP000893.1-201ENST00000474462 794 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-496P-201ENST00000516145 99 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 MIR4308-201ENST00000580634 81 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 MIR4282-201ENST00000583613 67 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RN7SL435P-201ENST00000584418 282 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC084757.4-201ENST00000616350 526 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 AC107027.3-201ENST00000565095 3473 ntBASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDZRN3Q9UPQ7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AL138713.1-201ENST00000624026 2130 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-818P-201ENST00000364837 108 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 RNU5E-6P-201ENST00000365574 115 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-429P-201ENST00000384582 108 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 RPL36AP10-201ENST00000421785 322 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 RPL23AP1-201ENST00000428990 471 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC010881.1-201ENST00000433830 235 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC016831.4-201ENST00000438302 307 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 PPIAP21-201ENST00000464473 501 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 SCARNA22-201ENST00000503991 125 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC108078.2-201ENST00000510750 236 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC074250.1-201ENST00000511117 192 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 RN7SKP21-201ENST00000516503 220 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC006272.2-201ENST00000594725 163 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 MIR6830-201ENST00000636015 70 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AP000756.2-201ENST00000624168 2567 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC005332.5-201ENST00000591222 2919 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 AC007785.2-201ENST00000598627 1916 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms