Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AP002770.2-201ENST00000543613 532 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 GLYCAM1-201ENST00000546596 285 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.57□□□□□ -2
CDH9Q9ULB4 HMGN2P15-201ENST00000585707 270 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AC002545.1-201ENST00000592511 181 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 SDR42E1P2-201ENST00000614861 481 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AC079395.3-201ENST00000615161 484 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.56□□□□□ -2
CDH9Q9ULB4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.56□□□□□ -2
CDH9Q9ULB4 RNU6-223P-201ENST00000362830 107 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 RNU6-777P-201ENST00000364265 104 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.56□□□□□ -2
CDH9Q9ULB4 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 RNU6-1176P-201ENST00000390955 107 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AL513331.1-201ENST00000411908 397 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.56□□□□□ -2
CDH9Q9ULB4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.56□□□□□ -2
CDH9Q9ULB4 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
CDH9Q9ULB4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.56□□□□□ -2
CDH9Q9ULB4 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AL031313.1-201ENST00000448435 256 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.56□□□□□ -2
CDH9Q9ULB4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.56□□□□□ -2
CDH9Q9ULB4 AC114786.4-201ENST00000508771 728 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.56□□□□□ -2
CDH9Q9ULB4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.56□□□□□ -2
CDH9Q9ULB4 AC114797.1-201ENST00000514003 728 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 HMGB1P41-201ENST00000520234 440 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.56□□□□□ -2
CDH9Q9ULB4 ATP5F1P5-201ENST00000526403 760 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC021269.2-201ENST00000532318 330 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.56□□□□□ -2
CDH9Q9ULB4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.56□□□□□ -2
CDH9Q9ULB4 TPMTP1-201ENST00000592307 737 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.56□□□□□ -2
CDH9Q9ULB4 AL355877.2-201ENST00000603670 358 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC136601.2-201ENST00000604356 474 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 FTX_3.1-201ENST00000610451 147 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC006386.1-201ENST00000619436 415 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.56□□□□□ -2
CDH9Q9ULB4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.56□□□□□ -2
CDH9Q9ULB4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH9Q9ULB4 AC069528.2-201ENST00000624849 1991 ntBASIC2.56□□□□□ -2
CDH9Q9ULB4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDH9Q9ULB4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CDH9Q9ULB4 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 MIR122-201ENST00000385044 85 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 RPS4XP7-201ENST00000406274 780 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 SNORA11.2-201ENST00000408318 127 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.55□□□□□ -2
CDH9Q9ULB4 RNA5SP508-201ENST00000411327 119 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDH9Q9ULB4 AL035407.1-201ENST00000429211 571 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 MYL8P-204ENST00000431574 518 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC098826.1-201ENST00000433943 471 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 RPS15AP7-201ENST00000439294 405 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.55□□□□□ -2
CDH9Q9ULB4 EXOSC3P1-201ENST00000448649 500 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.55□□□□□ -2
CDH9Q9ULB4 RPL37P25-201ENST00000507308 276 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 MTND4P9-201ENST00000507819 1346 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 CDC42P4-201ENST00000510507 563 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC025881.1-201ENST00000518851 512 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC022634.1-201ENST00000520765 532 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC025281.1-201ENST00000567026 265 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AC009163.5-201ENST00000575421 637 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.55□□□□□ -2
CDH9Q9ULB4 OR1M4P-201ENST00000589199 287 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.55□□□□□ -2
CDH9Q9ULB4 AC009902.3-201ENST00000606235 2172 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 AC245517.5-201ENST00000611529 162 ntBASIC2.55□□□□□ -2
CDH9Q9ULB4 CCT4P2-201ENST00000233836 1548 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDH9Q9ULB4 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 RNA5SP126-201ENST00000365092 109 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AL513475.1-201ENST00000406602 315 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 UBE2FP1-201ENST00000416536 447 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.54□□□□□ -2
CDH9Q9ULB4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms